Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 228 2e-55 >SEQ43492 Length=1174 Score = 228 bits (252), Expect = 2e-55 Identities = 300/412 (73%), Gaps = 8/412 (2%) Strand=Plus/Minus Query 31736 GAGGGCGATTTACGCACCATCTACCCGCGGGGTGAGCTGCCGCTGATTGGCCGCTCGTTT 31795 ||||| || || | || ||| ||||| || || |||||| ||| || ||| | | Sbjct 908 GAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGTC 849 Query 31796 GTGCTGGGCGTCTAT-GACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAACACGG 31854 |||||||| | || |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 848 GTGCTGGG-GCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790 Query 31855 GATCGAGCTGCGCGACTACCGCGTTGATTATCACTGGTGGGAAGCCGGGCACACGGAAAA 31914 || | ||| | || |||||||||||||||| ||||||| ||| |||| ||||| Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGG-AGCGGGGC-----GAAAA 736 Query 31915 TTTTTATCAGGATTGCTGGTATGAATGCGGTTTCCGGGAGTTCGACGGGCCGCCGCAGCC 31974 | | || ||| |||| | || |||||||| |||||||||||||| || ||| ||| Sbjct 735 TCTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCC 676 Query 31975 GGGCGACATGGTGATCATGCAGGTAAGCGCGCCGCGCTGGAACCACGCCGGGATTTTGCT 32034 ||| ||||||||||| |||| ||| ||| ||| |||||| ||||| ||| |||| Sbjct 675 GGGTGACATGGTGATTATGCTGGTTTCCGCACCGGTGGCGAACCATGCCGGTATTCTGCT 616 Query 32035 GGAGGGCAACATGCTGTTGCATCACCTGTACGGGCACCAGTCGGGGCGCACGCCTTACGG 32094 || | ||| || ||| ||| ||||||| | | ||| ||||||||| Sbjct 615 TGAAGATGGTATGTTGCTGCCCCACATGTACGGCATGCTGAGCCAGCGGGTGCCTTACGG 556 Query 32095 GGGCTACTGGCGTGAACGAACCATGAAGATTGTGCGCCACAAGGATCTGATG 32146 || || ||| || ||||| ||||| | |||||||||| || |||||| Sbjct 555 TGGTTATTGGAAAGAGCGAACTGTGAAGGTGCTGCGCCACAAAGAGCTGATG 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127725232527360