Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019402.1 Length=76631 Score E Sequences producing significant alignments: (Bits) Value SEQ41464 123 1e-23 >SEQ41464 Length=761 Score = 123 bits (136), Expect = 1e-23 Identities = 244/357 (68%), Gaps = 8/357 (2%) Strand=Plus/Minus Query 15555 TTCTGTACTCCGGGTACAATTCCATTCTCTAACATTTATAACAACGAATCAGCATCTGGT 15614 |||||||| ||||| || || ||||| ||||||||| | || |||| Sbjct 580 TTCTGTACGCCGGGCGTCATGCCGTTCTCCAACATTTATCAGGCGGA--CAGCCAA---- 527 Query 15615 CAGTTCGATGGTTGGCACGGTATGCCTTATCCGGGTTACCAACACCCAATGATTTGGATT 15674 |||||||||||||||||||| |||||||||||||| ||||| |||| | |||| | Sbjct 526 CAGTTCGATGGTTGGCACGGCATGCCTTATCCGGGCTACCAGTACCCGTTCATTTTCGTG 467 Query 15675 GATAATCCGGGTGATGTGGATGGTCGTAAGCTGAACAACATGGTTGAGTTCCTTTACCAA 15734 | | | ||| || || | ||| ||||||||||| ||||| || | || Sbjct 466 CACGCCGCCGCCGATCCCGACGGGGTGATGCTCAACAACATGGTCGAGTTTCTGTGGCAG 407 Query 15735 TCTCAGCAGTGGT-TCTACAACAAGTATGGAGAACTTGGTCCGGGTGCATCGGCTTATAT 15793 || |||||||||| || || ||| | || | || || || | |||||||| ||||| Sbjct 406 TCGCAGCAGTGGTATCAGCAGCAA-TTCGGCGTGCTGGGCCCCAGCGCATCGGCCTATAT 348 Query 15794 TTGGGACCGTTGGGATAACTACAAATATGGTACTCCAAACACTTGGACTATGTACCATTG 15853 ||| |||||||||| || | || ||| | | | || ||||| ||||| || || Sbjct 347 CTGGAACCGTTGGGACAATCTGAGTTACGGTCCGGCGGATACCTGGACCATGTATCACTG 288 Query 15854 GGGTGATGGACATGCATGGGCGGGCTATCAACCTCGTGCTTATTTCAGCGCTGCTCG 15910 |||||| || || ||| | |||||||| || || || | ||| | || || || Sbjct 287 GGGTGACGGCACGGCCTGGTCCGGCTATCAGCCACGCGCCTTCTTCGGTGCCGCGCG 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244956680307760