Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 143 8e-30 >SEQ43492 Length=1174 Score = 143 bits (158), Expect = 8e-30 Identities = 280/409 (68%), Gaps = 16/409 (4%) Strand=Plus/Minus Query 14204 GAGGGGGATTTACGTACCATTCAGCCACGCGGGGAGCTGCCATTGCTGGAGCGTCCGTTC 14263 ||||| || || | || || ||| |||||||| |||| | | | || | | || Sbjct 908 GAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGTC 849 Query 14264 GTGCTTGGCCACTTCGATTGCTGGGGTCTGGTAATGAGCTATTTCCGGCAGACCCACTGT 14323 ||||| || || ||| |||||||| ||| | |||||||||||||||||| ||| | Sbjct 848 GTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGGC 789 Query 14324 ATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGACTACCCGGACAAT 14383 || | |||||| |||||||| || |||||||| |||||||| | | || ||| Sbjct 788 ATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAAT 735 Query 14384 TTCTATCAGGAGTGCTGGTACGAGTGCGGATTCAGGGAGTTTGATGGTCCGCCTCAGGAA 14443 |||| ||| |||| |||| ||||| || ||||||| || || || || | Sbjct 734 CTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCCG 675 Query 14444 GGGGACCTCGTCATCATGCAGGT----GCAGGCCGATAAGTGGAATCATGCCGGGATTTT 14499 || ||| | || || |||| ||| ||| ||| | | ||| |||||||| ||| | Sbjct 674 GGTGACATGGTGATTATGCTGGTTTCCGCA--CCGGT--GGCGAACCATGCCGGTATTCT 619 Query 14500 ACTGGAGGGTAACATGCTGCTGCACCATCTTTACGGGCAT-CTGAGTCAACGTGTTCCTT 14558 || || | | ||| |||||| ||| | ||| ||||| ||||| || || || |||| Sbjct 618 GCTTGAAGATGGTATGTTGCTGCCCCACATGTAC-GGCATGCTGAGCCAGCGGGTGCCTT 560 Query 14559 ATGGCGGATACTGGCAGGAGCGCACAATGAAGATCGTTCGCTATAAAGA 14607 | || || || ||| | ||||| || ||||| | | ||| | ||||| Sbjct 559 ACGGTGGTTATTGGAAAGAGCGAACTGTGAAGGTGCTGCGCCACAAAGA 511 Score = 125 bits (138), Expect = 2e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 13914 AGAAAACCATTGATGCCATCATGGCACACGCTGCAGCGGAATATCCGCGAGAGTGCTGCG 13973 |||||||||| | || || ||||| ||||| | || || |||||| | ||||| |||| Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062 Query 13974 GCGTGGTGGCACAGAAAAGCCGGGTTGAGCGCTATTTTCCCTGTCGTAATCTCGCAGCAG 14033 || | ||||| |||||| ||| |||||||| || |||||||| |||||||| || | Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGCGGACA 1002 Query 14034 AGCCGACTGAACATTTTCACCTGTCCCCCGAAGATTACGCAGCGGCAGAAGACTGGGGGA 14093 | || || || || ||||||||||| || || ||||| | | || | || ||||||| Sbjct 1001 ATCCCACCGAGCAGTTTCACCTGTCACCAGAGGATTATGTGCCCGCTGCCGAGTGGGGGA 942 Query 14094 CG 14095 || Sbjct 941 CG 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141800722019370