Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_019705.1
Length=38759
Score E
Sequences producing significant alignments: (Bits) Value
SEQ43492 206 7e-49
>SEQ43492
Length=1174
Score = 206 bits (228), Expect = 7e-49
Identities = 292/406 (72%), Gaps = 12/406 (3%)
Strand=Plus/Minus
Query 12237 GGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGTT 12296
|||||| || || | || ||| ||||||||| ||| |||| | | | | || | | |
Sbjct 909 GGAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGT 850
Query 12297 TGTGCTTGGACACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTCCGGCAAACGCATGG 12356
||||| || || |||||||||||||||| | ||||||||||||||||| ||| ||
Sbjct 849 CGTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790
Query 12357 TATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGCCTATCCGGACAA 12416
|| | |||||| |||||||| || |||||||| |||||||| | | || ||
Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAA 736
Query 12417 TTTTTATCAGGATTGCTGGTATGAATGCGGATTCCGTGAATTCGACGGACCACCGAAACC 12476
| | || ||| |||| | || ||||| || || || |||||||| ||||||| ||
Sbjct 735 TCTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCC 676
Query 12477 CGGTGATATGGTGATCATGCAGG--TCCAGGCCGATAAGTGGAATCACGCGGGAATTCTG 12534
||||| |||||||| |||| || ||| ||| | | ||| || || || ||||||
Sbjct 675 GGGTGACATGGTGATTATGCTGGTTTCCGCACCGGT--GGCGAACCATGCCGGTATTCTG 618
Query 12535 CTGGAGGGAAATATGCTGCTGCACCACCTGTACGGACAT-CTGAGCCAGCGCGTGCCGTA 12593
|| || | |||| |||||| |||| ||||||| ||| ||||||||||| ||||| ||
Sbjct 617 CTTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCTTA 559
Query 12594 TGGTGGCTACTGGCAGGAAAGGACGATGAAGATTCTACGTTACAAA 12639
||||| || ||| | || | || ||||| | || || |||||
Sbjct 558 CGGTGGTTATTGGAAAGAGCGAACTGTGAAGGTGCTGCGCCACAAA 513
Score = 118 bits (130), Expect = 3e-22
Identities = 138/185 (75%), Gaps = 6/185 (3%)
Strand=Plus/Minus
Query 11948 AGAAAACCATCGATGCCATCATGGCGCATGCCGCTGCGGAATACCCGCGAGAGTGCTGCG 12007
|||||||||| | || || |||||||| |||| || || || ||| | ||||| ||||
Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062
Query 12008 GCGTGGTGGCGCAGAAAAGCCGGGTTGAGCGTTATTTCCCCTGCCGCAACCTTTCTGAAG 12067
|| | |||||||||||| ||| ||||||||||| || |||||||| || || | ||
Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGCGGACA 1002
Query 12068 AGCCGACAGAACATTTTCACCTTTCTCCCGAAGACTACG---CAGCTGCCGAAGACTGGG 12124
| || || || || |||||||| || || || || || | | |||||| || ||||
Sbjct 1001 ATCCCACCGAGCAGTTTCACCTGTCACCAGAGGATTATGTGCCCGCTGCC---GAGTGGG 945
Query 12125 GGACG 12129
|||||
Sbjct 944 GGACG 940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123839361195210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |