Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_019709.1
Length=41567
Score E
Sequences producing significant alignments: (Bits) Value
SEQ43492 196 1e-45
>SEQ43492
Length=1174
Score = 196 bits (216), Expect = 1e-45
Identities = 280/390 (72%), Gaps = 12/390 (3%)
Strand=Plus/Minus
Query 13047 GAGGGGGATTTACGTACCATTCAGCCGCGTGGTGAGTTGCCACTGCTGGAGCGTCCGTTT 13106
||||| || || | || || |||||| || || ||||| | | | | || | | |
Sbjct 908 GAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGTC 849
Query 13107 GTGCTTGGACACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTCCGGCAGACCCACGGT 13166
||||| || || |||||||||||||||| | |||||||||||||||||| |||||
Sbjct 848 GTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGGC 789
Query 13167 ATCGAGCTCCACGATTACCGGGTTGATTATCCCTGGTGGGAAAACGACTATCCGGACAAC 13226
|| | |||||| |||||||| ||||||||||| |||||||| | | || ||
Sbjct 788 ATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAAT 735
Query 13227 TTCTATCAGGATTGCTGGTATGAGTGCGGATTCCGGGAATTCGACGGGCCACCGAAACCC 13286
|||| ||| |||| | || ||||| || ||||| |||||||| ||||||| ||
Sbjct 734 CTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCCG 675
Query 13287 GGCGATATGGTGATCATGCAGG--TCCAGGCTGATAAGTGGAACCACGCTGGAATTCTGC 13344
|| || |||||||| |||| || ||| | | | | |||||| || || |||||||
Sbjct 674 GGTGACATGGTGATTATGCTGGTTTCCGCACCGGT--GGCGAACCATGCCGGTATTCTGC 617
Query 13345 TGGAGGGCAATATGCTGCTGCACCACCTGTACGGACAT-CTGAGCCAACGCGTGCCGTAT 13403
| || | |||| |||||| |||| ||||||| ||| |||||||| || ||||| ||
Sbjct 616 TTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCTTAC 558
Query 13404 GGTGGCTACTGGCAGGAAAGGACGATGAAG 13433
||||| || ||| | || | || |||||
Sbjct 557 GGTGGTTATTGGAAAGAGCGAACTGTGAAG 528
Score = 104 bits (114), Expect = 6e-18
Identities = 123/166 (74%), Gaps = 7/166 (4%)
Strand=Plus/Minus
Query 12713 GGTGGCTTCCCTGGTACGTCGCTGAT----CAGGAGTTGAT---ATGCGTCAGAAAACCA 12765
|| ||||||||||| | ||||||| ||| || ||| ||| |||||||||
Sbjct 1172 GGCGGCTTCCCTGGCGCAGCGCTGATAAAGCAGTAGGTGACGTCATGAAAGAGAAAACCA 1113
Query 12766 TCGATGCGATTATGGCGCATGCCGCCGCTGAATATCCTCGTGAGTGCTGCGGTGTGGTGG 12825
| | || ||||||||||| |||| ||||| ||||| | ||||| ||||| | ||||
Sbjct 1112 TAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCGGCATCGTGG 1053
Query 12826 CGCAAAAAAGCCGTGTTGAACGTTATTTTCCTTGCCGGAATCTTGC 12871
|||| ||| ||| ||||| ||||| ||||| ||||| ||||| ||
Sbjct 1052 CGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGC 1007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132820041607290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |