Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019709.1 Length=41567 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 196 1e-45 >SEQ43492 Length=1174 Score = 196 bits (216), Expect = 1e-45 Identities = 280/390 (72%), Gaps = 12/390 (3%) Strand=Plus/Minus Query 13047 GAGGGGGATTTACGTACCATTCAGCCGCGTGGTGAGTTGCCACTGCTGGAGCGTCCGTTT 13106 ||||| || || | || || |||||| || || ||||| | | | | || | | | Sbjct 908 GAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGTC 849 Query 13107 GTGCTTGGACACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTCCGGCAGACCCACGGT 13166 ||||| || || |||||||||||||||| | |||||||||||||||||| ||||| Sbjct 848 GTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGGC 789 Query 13167 ATCGAGCTCCACGATTACCGGGTTGATTATCCCTGGTGGGAAAACGACTATCCGGACAAC 13226 || | |||||| |||||||| ||||||||||| |||||||| | | || || Sbjct 788 ATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAAT 735 Query 13227 TTCTATCAGGATTGCTGGTATGAGTGCGGATTCCGGGAATTCGACGGGCCACCGAAACCC 13286 |||| ||| |||| | || ||||| || ||||| |||||||| ||||||| || Sbjct 734 CTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCCG 675 Query 13287 GGCGATATGGTGATCATGCAGG--TCCAGGCTGATAAGTGGAACCACGCTGGAATTCTGC 13344 || || |||||||| |||| || ||| | | | | |||||| || || ||||||| Sbjct 674 GGTGACATGGTGATTATGCTGGTTTCCGCACCGGT--GGCGAACCATGCCGGTATTCTGC 617 Query 13345 TGGAGGGCAATATGCTGCTGCACCACCTGTACGGACAT-CTGAGCCAACGCGTGCCGTAT 13403 | || | |||| |||||| |||| ||||||| ||| |||||||| || ||||| || Sbjct 616 TTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCTTAC 558 Query 13404 GGTGGCTACTGGCAGGAAAGGACGATGAAG 13433 ||||| || ||| | || | || ||||| Sbjct 557 GGTGGTTATTGGAAAGAGCGAACTGTGAAG 528 Score = 104 bits (114), Expect = 6e-18 Identities = 123/166 (74%), Gaps = 7/166 (4%) Strand=Plus/Minus Query 12713 GGTGGCTTCCCTGGTACGTCGCTGAT----CAGGAGTTGAT---ATGCGTCAGAAAACCA 12765 || ||||||||||| | ||||||| ||| || ||| ||| ||||||||| Sbjct 1172 GGCGGCTTCCCTGGCGCAGCGCTGATAAAGCAGTAGGTGACGTCATGAAAGAGAAAACCA 1113 Query 12766 TCGATGCGATTATGGCGCATGCCGCCGCTGAATATCCTCGTGAGTGCTGCGGTGTGGTGG 12825 | | || ||||||||||| |||| ||||| ||||| | ||||| ||||| | |||| Sbjct 1112 TAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCGGCATCGTGG 1053 Query 12826 CGCAAAAAAGCCGTGTTGAACGTTATTTTCCTTGCCGGAATCTTGC 12871 |||| ||| ||| ||||| ||||| ||||| ||||| ||||| || Sbjct 1052 CGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGC 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132820041607290