Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019714.1 Length=39026 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 203 8e-48 >SEQ43492 Length=1174 Score = 203 bits (224), Expect = 8e-48 Identities = 282/391 (72%), Gaps = 12/391 (3%) Strand=Plus/Minus Query 13093 GGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGTT 13152 |||||| || || | || ||| ||||||||| ||| |||| | | | | || | | | Sbjct 909 GGAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGT 850 Query 13153 TGTGCTTGGACACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTCCGGCAAACGCATGG 13212 ||||| || || |||||||||||||||| | ||||||||||||||||| ||| || Sbjct 849 CGTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790 Query 13213 TATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGCCTATCCGGACAA 13272 || | |||||| |||||||| || |||||||| |||||||| | | || || Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAA 736 Query 13273 TTTTTATCAGGATTGCTGGTATGAATGCGGATTCCGTGAATTCGACGGACCACCGAAACC 13332 | | || ||| |||| | || ||||| || || || |||||||| ||||||| || Sbjct 735 TCTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCC 676 Query 13333 CGGTGATATGGTGATCATGCAGG--TCCAGGCCGATAAGTGGAATCACGCGGGAATTCTG 13390 ||||| |||||||| |||| || ||| ||| | | ||| || || || |||||| Sbjct 675 GGGTGACATGGTGATTATGCTGGTTTCCGCACCGGT--GGCGAACCATGCCGGTATTCTG 618 Query 13391 CTGGAGGGAAATATGCTGCTGCACCACCTGTACGGACAT-CTGAGCCAGCGCGTGCCGTA 13449 || || | |||| |||||| |||| ||||||| ||| ||||||||||| ||||| || Sbjct 617 CTTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCTTA 559 Query 13450 TGGTGGCTACTGGCAGGAAAGGACGATGAAG 13480 ||||| || ||| | || | || ||||| Sbjct 558 CGGTGGTTATTGGAAAGAGCGAACTGTGAAG 528 Score = 100 bits (110), Expect = 7e-17 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 12804 AGAAAACCATCGATGCGATTATGGCGCATGCCGCCGCTGAATATCCTCGTGAGTGCTGCG 12863 |||||||||| | || ||||||||||| |||| ||||| ||||| | ||||| |||| Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062 Query 12864 GTGTGGTGGCGCAAAAAAGCCGTGTTGAACGTTATTTTCCTTGCCGGAATCTTGC 12918 | | |||||||| ||| ||| ||||| ||||| ||||| ||||| ||||| || Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGC 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124693293413880