Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 152 1e-32 >SEQ43492 Length=1174 Score = 152 bits (168), Expect = 1e-32 Identities = 271/391 (69%), Gaps = 16/391 (4%) Strand=Plus/Minus Query 14215 GAGGGGGATTTACGTACCATTCAGCCACGCGGGGAGCTGCCATTGCTGGAGCGTCCGTTC 14274 ||||| || || | || || ||| |||||||| |||| | | | || | | || Sbjct 908 GAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGTC 849 Query 14275 GTGCTTGGCCACTTCGATTGCTGGGGTCTGGTAATGAGCTATTTCCGGCAGACCCACGGT 14334 ||||| || || ||| |||||||| ||| | |||||||||||||||||| ||||| Sbjct 848 GTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGGC 789 Query 14335 ATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGACTACCCGGACAAT 14394 || | |||||| |||||||| || |||||||| |||||||| | | || ||| Sbjct 788 ATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAAT 735 Query 14395 TTCTATCAGGAGTGCTGGTACGAGTGCGGATTCAGGGAGTTTGATGGCCCGCCTCAGGAA 14454 |||| ||| |||| |||| ||||| || ||||||| || ||||| || | Sbjct 734 CTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCCG 675 Query 14455 GGGGACCTCGTCATCATGCAGGT----GCAGGCCGATAAGTGGAATCATGCCGGGATTTT 14510 || ||| | || || |||| ||| ||| ||| | | ||| |||||||| ||| | Sbjct 674 GGTGACATGGTGATTATGCTGGTTTCCGCA--CCGGT--GGCGAACCATGCCGGTATTCT 619 Query 14511 ACTGGAGGGTAACATGCTGCTGCACCATCTTTACGGGCAT-CTGAGTCAGCGTGTTCCTT 14569 || || | | ||| |||||| ||| | ||| ||||| ||||| ||||| || |||| Sbjct 618 GCTTGAAGATGGTATGTTGCTGCCCCACATGTAC-GGCATGCTGAGCCAGCGGGTGCCTT 560 Query 14570 ATGGAGGATACTGGCAGGAGCGCACGATGAA 14600 | || || || ||| | ||||| || |||| Sbjct 559 ACGGTGGTTATTGGAAAGAGCGAACTGTGAA 529 Score = 129 bits (142), Expect = 2e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 13925 AGAAAACCATTGATGCCATCATGGCACACGCTGCAGCGGAATATCCGCGCGAGTGCTGCG 13984 |||||||||| | || || ||||| ||||| | || || |||||| ||||||| |||| Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062 Query 13985 GCGTGGTGGCACAGAAAAGCCGGGTTGAGCGCTATTTTCCCTGTCGTAATCTCGCAGCAG 14044 || | ||||| |||||| ||| |||||||| || |||||||| |||||||| || | Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGCGGACA 1002 Query 14045 AGCCGACTGAACATTTTCACCTGTCCCCCGAAGATTACGCAGCGGCAGAAGACTGGGGGA 14104 | || || || || ||||||||||| || || ||||| | | || | || ||||||| Sbjct 1001 ATCCCACCGAGCAGTTTCACCTGTCACCAGAGGATTATGTGCCCGCTGCCGAGTGGGGGA 942 Query 14105 C 14105 | Sbjct 941 C 941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144970185797280