Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_019717.1
Length=45366
Score E
Sequences producing significant alignments: (Bits) Value
SEQ43492 152 1e-32
>SEQ43492
Length=1174
Score = 152 bits (168), Expect = 1e-32
Identities = 271/391 (69%), Gaps = 16/391 (4%)
Strand=Plus/Minus
Query 14215 GAGGGGGATTTACGTACCATTCAGCCACGCGGGGAGCTGCCATTGCTGGAGCGTCCGTTC 14274
||||| || || | || || ||| |||||||| |||| | | | || | | ||
Sbjct 908 GAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGTC 849
Query 14275 GTGCTTGGCCACTTCGATTGCTGGGGTCTGGTAATGAGCTATTTCCGGCAGACCCACGGT 14334
||||| || || ||| |||||||| ||| | |||||||||||||||||| |||||
Sbjct 848 GTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGGC 789
Query 14335 ATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGACTACCCGGACAAT 14394
|| | |||||| |||||||| || |||||||| |||||||| | | || |||
Sbjct 788 ATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAAT 735
Query 14395 TTCTATCAGGAGTGCTGGTACGAGTGCGGATTCAGGGAGTTTGATGGCCCGCCTCAGGAA 14454
|||| ||| |||| |||| ||||| || ||||||| || ||||| || |
Sbjct 734 CTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCCG 675
Query 14455 GGGGACCTCGTCATCATGCAGGT----GCAGGCCGATAAGTGGAATCATGCCGGGATTTT 14510
|| ||| | || || |||| ||| ||| ||| | | ||| |||||||| ||| |
Sbjct 674 GGTGACATGGTGATTATGCTGGTTTCCGCA--CCGGT--GGCGAACCATGCCGGTATTCT 619
Query 14511 ACTGGAGGGTAACATGCTGCTGCACCATCTTTACGGGCAT-CTGAGTCAGCGTGTTCCTT 14569
|| || | | ||| |||||| ||| | ||| ||||| ||||| ||||| || ||||
Sbjct 618 GCTTGAAGATGGTATGTTGCTGCCCCACATGTAC-GGCATGCTGAGCCAGCGGGTGCCTT 560
Query 14570 ATGGAGGATACTGGCAGGAGCGCACGATGAA 14600
| || || || ||| | ||||| || ||||
Sbjct 559 ACGGTGGTTATTGGAAAGAGCGAACTGTGAA 529
Score = 129 bits (142), Expect = 2e-25
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 13925 AGAAAACCATTGATGCCATCATGGCACACGCTGCAGCGGAATATCCGCGCGAGTGCTGCG 13984
|||||||||| | || || ||||| ||||| | || || |||||| ||||||| ||||
Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062
Query 13985 GCGTGGTGGCACAGAAAAGCCGGGTTGAGCGCTATTTTCCCTGTCGTAATCTCGCAGCAG 14044
|| | ||||| |||||| ||| |||||||| || |||||||| |||||||| || |
Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGCGGACA 1002
Query 14045 AGCCGACTGAACATTTTCACCTGTCCCCCGAAGATTACGCAGCGGCAGAAGACTGGGGGA 14104
| || || || || ||||||||||| || || ||||| | | || | || |||||||
Sbjct 1001 ATCCCACCGAGCAGTTTCACCTGTCACCAGAGGATTATGTGCCCGCTGCCGAGTGGGGGA 942
Query 14105 C 14105
|
Sbjct 941 C 941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144970185797280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |