Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019719.1 Length=41528 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 168 2e-37 >SEQ43492 Length=1174 Score = 168 bits (186), Expect = 2e-37 Identities = 276/393 (70%), Gaps = 16/393 (4%) Strand=Plus/Minus Query 13098 GGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGTT 13157 |||||| || || | || ||| ||||||||| ||| |||| | | | | || | | | Sbjct 909 GGAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGT 850 Query 13158 TGTGCTTGGACACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTCCGGCAAACGCATGG 13217 ||||| || || |||||||||||||||| | ||||||||||||||||| ||| || Sbjct 849 CGTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790 Query 13218 TATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGCCTATCCGGACAA 13277 || | |||||| |||||||| || |||||||| |||||||| | | || || Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAA 736 Query 13278 TTTTTATCAGGATTGCTGGTATGAATGCGGATTCAGGGAGTTTGACGGCCCGCCTCAGGA 13337 | | || ||| |||| | || ||||| || ||||||| |||||||| || | Sbjct 735 TCTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCC 676 Query 13338 AGGGGACCTCGTCATCATGCAGGT----GCAGGCCGATAAGTGGAATCATGCCGGGATTT 13393 || ||| | || || |||| ||| ||| ||| | | ||| |||||||| ||| Sbjct 675 GGGTGACATGGTGATTATGCTGGTTTCCGCA--CCGGT--GGCGAACCATGCCGGTATTC 620 Query 13394 TACTGGAGGGTAACATGCTGCTGCACCACCTGTACGGACAT-CTGAGCCAGCGCGTGCCG 13452 | || || | | ||| |||||| |||| ||||||| ||| ||||||||||| ||||| Sbjct 619 TGCTTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCT 561 Query 13453 TATGGGGGCTACTGGCAGGAAAGGACGATGAAG 13485 || || || || ||| | || | || ||||| Sbjct 560 TACGGTGGTTATTGGAAAGAGCGAACTGTGAAG 528 Score = 107 bits (118), Expect = 5e-19 Identities = 164/233 (70%), Gaps = 7/233 (3%) Strand=Plus/Minus Query 12765 GGTGGCTTCCCTGGTACGTCGCTGAT----CAGGAGTTGAT---ATGCGTCAGAAAACCA 12817 || ||||||||||| | ||||||| ||| || ||| ||| ||||||||| Sbjct 1172 GGCGGCTTCCCTGGCGCAGCGCTGATAAAGCAGTAGGTGACGTCATGAAAGAGAAAACCA 1113 Query 12818 TCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGTGGCGTGGTGG 12877 | | || ||||||||||| || | ||||| ||||| | |||||||| ||| | |||| Sbjct 1112 TAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCGGCATCGTGG 1053 Query 12878 CGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGAGCCGACAG 12937 |||| || ||| || ||| || ||||| || |||| || || | | || || | Sbjct 1052 CGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGCGGACAATCCCACCG 993 Query 12938 AACATTTTCACCTGTCTCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACG 12990 | || ||||||||||| ||||| || |||| | |||| || ||||| ||| Sbjct 992 AGCAGTTTCACCTGTCACCAGAGGATTATGTGCCCGCTGCCGAGTGGGGGACG 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132695309934900