Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 197 4e-46 >SEQ43492 Length=1174 Score = 197 bits (218), Expect = 4e-46 Identities = 283/392 (72%), Gaps = 14/392 (4%) Strand=Plus/Minus Query 12606 GGAGGGTGATTTACGCACCATCCAGCCGCGTGGAGAACTGCCGTTGCTGGAGCGTCCGTT 12665 ||||||||| || | || ||| |||||| || ||| ||||| | | | || | | | Sbjct 909 GGAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGT 850 Query 12666 TGTGCTTGGACACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTTCGGCAAACGCATGG 12725 ||||| || || |||||||||||||||| | ||||||||||| ||||| ||| || Sbjct 849 CGTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790 Query 12726 TATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGACTATCCGGACAA 12785 || | |||||| |||||||| || |||||||| |||||||| | | || || Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAA 736 Query 12786 CTTCTATCAT-GATTGCTGGTACGAGTGCGGTTTCCGTGAATTCGACGGGCCACCGAAAC 12844 |||| ||| || |||| |||| |||||||| || || |||||||| ||||||| | Sbjct 735 TCTCTA-CATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGC 677 Query 12845 CAGGCGATATGGTGATCATGCAGG--TCCAGGCTGATAAGTGGAACCACGCGGGGATCCT 12902 | || || |||||||| |||| || ||| | | | | |||||| || || || || Sbjct 676 CGGGTGACATGGTGATTATGCTGGTTTCCGCACCGGT--GGCGAACCATGCCGGTATTCT 619 Query 12903 GCTGCAGGGTAATATGCTGCTGCACCACCTGTACGGACAT-TTGAGCCAGCGCGTGCCAT 12961 ||| | | | |||| |||||| |||| ||||||| ||| |||||||||| ||||| | Sbjct 618 GCTTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCTT 560 Query 12962 ATGGTGGCTACTGGCAGGAAAGAACAATGAAG 12993 | ||||| || ||| | || |||| ||||| Sbjct 559 ACGGTGGTTATTGGAAAGAGCGAACTGTGAAG 528 Score = 104 bits (114), Expect = 6e-18 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 12317 AGAAAACCATTGATGCCATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGTGCTGCG 12376 |||||||||| | || ||||||||||| || | ||||| ||||| ||||||| |||| Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062 Query 12377 GCGTGGTGGCGCAGAAAAGCCGTGTTGAACGTTATTTCCCGTGCCGCAATCTTGC 12431 || | |||||||||||| ||| ||||| ||||| || || ||||| ||||| || Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGC 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127901136167910