Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_019721.1
Length=40029
Score E
Sequences producing significant alignments: (Bits) Value
SEQ43492 197 4e-46
>SEQ43492
Length=1174
Score = 197 bits (218), Expect = 4e-46
Identities = 283/392 (72%), Gaps = 14/392 (4%)
Strand=Plus/Minus
Query 12606 GGAGGGTGATTTACGCACCATCCAGCCGCGTGGAGAACTGCCGTTGCTGGAGCGTCCGTT 12665
||||||||| || | || ||| |||||| || ||| ||||| | | | || | | |
Sbjct 909 GGAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGT 850
Query 12666 TGTGCTTGGACACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTTCGGCAAACGCATGG 12725
||||| || || |||||||||||||||| | ||||||||||| ||||| ||| ||
Sbjct 849 CGTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790
Query 12726 TATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGACTATCCGGACAA 12785
|| | |||||| |||||||| || |||||||| |||||||| | | || ||
Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAA 736
Query 12786 CTTCTATCAT-GATTGCTGGTACGAGTGCGGTTTCCGTGAATTCGACGGGCCACCGAAAC 12844
|||| ||| || |||| |||| |||||||| || || |||||||| ||||||| |
Sbjct 735 TCTCTA-CATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGC 677
Query 12845 CAGGCGATATGGTGATCATGCAGG--TCCAGGCTGATAAGTGGAACCACGCGGGGATCCT 12902
| || || |||||||| |||| || ||| | | | | |||||| || || || ||
Sbjct 676 CGGGTGACATGGTGATTATGCTGGTTTCCGCACCGGT--GGCGAACCATGCCGGTATTCT 619
Query 12903 GCTGCAGGGTAATATGCTGCTGCACCACCTGTACGGACAT-TTGAGCCAGCGCGTGCCAT 12961
||| | | | |||| |||||| |||| ||||||| ||| |||||||||| ||||| |
Sbjct 618 GCTTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCTT 560
Query 12962 ATGGTGGCTACTGGCAGGAAAGAACAATGAAG 12993
| ||||| || ||| | || |||| |||||
Sbjct 559 ACGGTGGTTATTGGAAAGAGCGAACTGTGAAG 528
Score = 104 bits (114), Expect = 6e-18
Identities = 92/115 (80%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 12317 AGAAAACCATTGATGCCATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGTGCTGCG 12376
|||||||||| | || ||||||||||| || | ||||| ||||| ||||||| ||||
Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062
Query 12377 GCGTGGTGGCGCAGAAAAGCCGTGTTGAACGTTATTTCCCGTGCCGCAATCTTGC 12431
|| | |||||||||||| ||| ||||| ||||| || || ||||| ||||| ||
Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGC 1007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127901136167910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |