Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 205 2e-48 >SEQ43492 Length=1174 Score = 205 bits (226), Expect = 2e-48 Identities = 282/390 (72%), Gaps = 12/390 (3%) Strand=Plus/Minus Query 13046 GAGGGGGATTTGCGCACCATCCAGCCGCGTGGGGAACTGCCGCTGCTGGAGCGTCCGTTT 13105 ||||| || ||| | || ||| |||||| |||||| |||||| | | | || | | | Sbjct 908 GAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGTC 849 Query 13106 GTGCTTGGCCACTTCGACTGCTGGGGTCTGGTAATGAGCTATTTCCGGCAAACGCATGGT 13165 ||||| || || |||||||||||| ||| | ||||||||||||||||| ||| || Sbjct 848 GTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGGC 789 Query 13166 ATCGAGCTCCACGATTACCGGGTTGATTATCCCTGGTGGGAAAACGACTATCCGGACAAC 13225 || | |||||| |||||||| ||||||||||| |||||||| | | || || Sbjct 788 ATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAAT 735 Query 13226 TTCTATCAGGATTGCTGGTATGAGTGCGGATTCCGTGAATTCGACGGACCACCGAAACCC 13285 |||| ||| |||| | || ||||| || || || |||||||| ||||||| || Sbjct 734 CTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCCG 675 Query 13286 GGCGATATGGTGATCATGCAGG--TCCAGGCTGATAAGTGGAACCACGCTGGAATTCTGC 13343 || || |||||||| |||| || ||| | | | | |||||| || || ||||||| Sbjct 674 GGTGACATGGTGATTATGCTGGTTTCCGCACCGGT--GGCGAACCATGCCGGTATTCTGC 617 Query 13344 TGGAGGGCAATATGCTGCTGCACCACCTGTACGGACAT-CTGAGCCAGCGCGTGCCGTAT 13402 | || | |||| |||||| |||| ||||||| ||| ||||||||||| ||||| || Sbjct 616 TTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCTTAC 558 Query 13403 GGTGGCTACTGGCAGGAAAGGACGATGAAG 13432 ||||| || ||| | || | || ||||| Sbjct 557 GGTGGTTATTGGAAAGAGCGAACTGTGAAG 528 Score = 100 bits (110), Expect = 8e-17 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 12756 AGAAAACCGTCGATGAGATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGTGTTGCG 12815 |||||||| | | | ||||||||||| || | ||||| ||||| |||||||||||| Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062 Query 12816 GCGTGGTGGCGCAGAAAAGCCGTGTTGAACGTTATTTCCCGTGCCGGAATCTTGC 12870 || | |||||||||||| ||| ||||| ||||| || || ||||| ||||| || Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGC 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132503415054300