Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019934.1 Length=39012 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 168 2e-37 >SEQ43492 Length=1174 Score = 168 bits (186), Expect = 2e-37 Identities = 236/328 (72%), Gaps = 6/328 (2%) Strand=Plus/Plus Query 5594 GCCGTACAGATGATGCAGCAGCTGGTTACCTTCCAGCAGAATACCGGCATGATTCACCAC 5653 |||||||| || |||||| | | |||| ||||||||||||||||| ||| |||| Sbjct 582 GCCGTACATGTGGGGCAGCAACATACCATCTTCAAGCAGAATACCGGCATGGTTCGCCAC 641 Query 5654 CGGCGCGGATACCTGCATCAGCACCATGTCGCCGGGGCGCGGCT--CTGT-GACCTCGCG 5710 ||| ||||| ||| |||| | ||||||||| || || ||| | || || ||| || Sbjct 642 CGGTGCGGAAACCAGCATAATCACCATGTCACCCGGCATCGGTGGGCCGTCGAACTCCCG 701 Query 5711 GAACCCCTCGGCATACCAGTTATCCATATAGAGATTCTCGCCCCGCTCCCACCACGGATA 5770 || || | | | |||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct 702 AAAACCGCAGTCGTGCCAGTTGTCCATGTAGAGATTTTCGCCCCGCTCCCACCACGGATA 761 Query 5771 ATCCACGCTGTAGTTGCGAAGCGTTACGCC---CTGCTGCCGGTGCCAGTCCATCACCAG 5827 ||| |||| ||| | | |||| || ||| || ||||||| || ||| | ||| Sbjct 762 ATCAACGCGGTAATCCTGGAGCGCTATGCCGTGCTCCTGCCGGAAATAGCTCATAATCAG 821 Query 5828 CGACCAGCAGTCGGCATAACCCAGCTCAAAGGCGCGTCCTTCCAGTGGCCGTTCGCCGCG 5887 | ||||||||||| || |||||| | | ||| ||| | | ||| ||| ||||| Sbjct 822 CCCCCAGCAGTCGGTATGCCCCAGCACGACCTGGCGACCTATCCGCGGCAATTCCCCGCG 881 Query 5888 GGGCTCGATGGTGCGCAGGTCGCCTTCC 5915 ||| ||| || | || ||| || ||| Sbjct 882 CGGCATGATCGTTCTCAAGTCACCCTCC 909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124648517941740