Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 96.9 3e-15 >SEQ10860 Length=7223 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| | |||||||| ||||| || || ||||| || Sbjct 1680 ATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 1621 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || || | || |||||||| ||| | || |||||| Sbjct 1620 GATACCATTGAAAATGTCAAAGCCAAGATTCAG-GACAAAGAAGGAATTCCTCCAGATCA 1562 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 |||| | | |||||||| ||||| |||||||||||| ||| | ||||||| || Sbjct 1561 ACAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTACAA 1502 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762 || |||||||| ||||| ||||| |||| Sbjct 1501 TATCCAAAAAGAGTCTACATTGCACTTGGT 1472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425165763048795