Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq61 102 4e-17 >seq61 Length=55249 Score = 102 bits (112), Expect = 4e-17 Identities = 302/463 (65%), Gaps = 2/463 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 |||||| |||| ||| || || |||||| | ||| || ||||||| || || || Sbjct 26791 CCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTAGAA 26732 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAA 26024 | ||| | ||||| ||||| || || ||| |||||||| || || ||||| |||| Sbjct 26731 GAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTG-TTCTTTTTGAGGTCCAAGAACTCAA 26673 Query 26025 AAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCAC 26084 | ||||| || ||||| ||||| | || || |||||| ||| || || || |||| Sbjct 26672 AGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGCTTGCCGCCAC 26613 Query 26085 CTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144 ||||||| || || | || | ||| || ||| | | ||| || || || ||| ||| Sbjct 26612 CTTGATCGACATAACGAGCCACATTATTAAACACTCTGAGCATGGGCACCAAACCATTTG 26553 Query 26145 AAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204 || || || |||| | ||| || || | | | |||| || ||| | | Sbjct 26552 AAGTGCCATTAGTGCCACAGATCGAGGTGCCCTTGGCACGAATACAATGCACATTGAGCC 26493 Query 26205 CGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTT 26264 | || |||||||| |||| || || |||||| | || | | |||||| |||| Sbjct 26492 CAATGCCACCAGCGGATTTGGAGATCATTGCACACTGCTCGACGGACTTGAAAATGCCTT 26433 Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTC 26324 ||| ||| |||| ||| | ||||| || || | || | | || | || Sbjct 26432 CGATGGAATCGGAAACCATTGTTAAAAGGAAACACGATGACATCTGGGGACGATTGGTGG 26373 Query 26325 CTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTC 26367 | | | |||||| || || | ||||| ||| |||| | ||| Sbjct 26372 CAGCAGCAAATAACGTTGGCGATGCATGCGTAAAATAGCGTTC 26330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252897815637875