Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1590 105 8e-18 >seq1590 Length=6779 Score = 105 bits (116), Expect = 8e-18 Identities = 175/248 (71%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || || || || | ||| || || || || ||||||||||| ||||| ||||||||| Sbjct 993 ACTCCGATGGGGCCCATGCCGGGGCCGCCGCCGCCATGTGGAATGCAGAAGGTCTTATGT 1052 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | ||||| || ||||||| |||| ||||| || || ||| Sbjct 1053 AGATTCAGATGTGACACATCGCTGCCGTAGTCACCTGGTCGGCACAGACCCACTTGAGCA 1112 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| ||||| || | ||| ||||||||||||| |||| || | | || | Sbjct 1113 TTCATATTAGCACCGTCTAAATAGACCTGACCACCATGAGCATGGACCAACGCGCAGA-- 1170 Query 138363 TGTCTG--ATGTTTGTTTCAAATAC-ACCATGAGTCGATGGATATGTAATCATAATACAT 138419 |||| | | | | ||| || || ||||| || ||||| || |||||||| | ||| Sbjct 1171 TGTCCGCAACGGTCTCTTCGAACACGCCCATG-GTGGATGGGTACGTAATCATCAAACAC 1229 Query 138420 GAGAGTTC 138427 || | ||| Sbjct 1230 GATAATTC 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578664715984600