Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq61 172 7e-38
seq735 91.5 2e-13
>seq61
Length=55249
Score = 172 bits (190), Expect = 7e-38
Identities = 642/991 (65%), Gaps = 23/991 (2%)
Strand=Plus/Plus
Query 75608 TACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGT 75667
||| ||||||| |||||| |||||||| | |||||| | || | | ||| ||
Sbjct 26645 TACCTGGAACCTTGGCATTCCGATATCTTTGAGTTCTTGGACCTCAAAAAGAACACGGGC 26704
Query 75668 GACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCAT 75726
| |||||| | | | | | | |||||||| | || ||||||| || || || || ||
Sbjct 26705 AAGGAAGAG-CACAGAGCTCGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGTTTAT 26763
Query 75727 GAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCT 75786
|||||| || |||| || | ||||| || || ||||| ||||| || || |
Sbjct 26764 GAAGCGTGTGGAGGCCAATGAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCGGCTT 26823
Query 75787 CTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTA 75845
|||| ||| || || ||||| || || |||||||| || ||| ||||||
Sbjct 26824 GGAAGACGTTTGGGGGGATGACTTTGAGAAGCTGTATACAAAGTACGA-GAGCGAGGGTC 26882
Query 75846 GAGCCAATGCGACTGTACCAGCCGCCGA-TGTTTGGAAGGCTATTCTCAAATCACAGACG 75904
| || ||| || || | | | | | ||||| | || ||| | |||| ||
Sbjct 26883 GCGCAAAT-CGTGTGATTAAAGCACAAACTCTTTGGTATGCCATTGTTGAATCTCAAGTT 26941
Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964
|||||||| || || || ||||| | |||||| |||| |||| |||||| || || ||
Sbjct 26942 GAGACTGGCACTCCGTACATGCTCTTCAAGGACTCTTGCAACAGGAAGAGCAATCAGCAG 27001
Query 75965 AATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG 76024
||| | || || ||||| || || || ||||| |||||| | || || | |
Sbjct 27002 AATGTTGGCACCATCAAATGCAGCAACCTCTGCACTGAAATTGTTGAATATTCGGCACCC 27061
Query 76025 GATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAG 76084
||||||| || || |||||||||||||| || ||| | | || ||| | | ||||
Sbjct 27062 GATGAGATTGCCGTCTGCAATTTGGCATCGATAGCCTTGAATATGTTTGTGACTTCAGAG 27121
Query 76085 ACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTA 76144
| || || |||| | ||||| | ||| | || || | ||| |||| |||| |
Sbjct 27122 A---AAACATTCGATTTCAAGAAACTGAAGGAAGTTACTAAAACTGTCACCAGAAATTTG 27178
Query 76145 AACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG---TCTAATATG 76201
||| | ||||||| | |||| ||||| | | | | | |||| || ||| |
Sbjct 27179 AACAAAATCATTGATATCAATTACTATCCGCT---GCCCGAGGCAAAGAAATCCAATTTA 27235
Query 76202 CGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC 76261
|||| | || ||||| | || ||||| || | || || | || ||| || ||
Sbjct 27236 AGACATCGTCCCATTGGCATTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCGT 27295
Query 76262 TACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTAT 76321
| | | ||| || ||||| | | ||| | ||||| |||||||| ||
Sbjct 27296 TTTCCCTATGAGAGTGACAAAGCCGTATTGCTCAATCAGCAGATCTTCGAAACCATCTAC 27355
Query 76322 CACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTT 76381
| | |||| ||||| |||||||| ||||| || | ||| ||||||| || |
Sbjct 27356 TATGGTGCCCTTGAGGCCAGTTGTGAGCTGGCTCAAAAGGACGGTCCCTATGAAACCTAC 27415
Query 76382 GAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGA-AGGTGAAAC-CA 76439
| |||| ||| | | | | || | || |||| ||||||||||| | | | | ||
Sbjct 27416 GCTGGTTGTCCGGTGAGCAAGGGAATTCTGCAGTACGATATGTGGGACAAGACACCCACA 27475
Query 76440 AGCTCAACTACGACTGGGATGTTCTCAA--GGAACGCATCAAGGAGAAGGGTCTTCGTAA 76497
|| | | || ||| || ||| || ||| ||||| ||| | || || | ||
Sbjct 27476 AG--CCTTTGGGATTGGACTGCTCTAAAATTGAA--AATCAAAGAGCATGGCGTTAGAAA 27531
Query 76498 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 76557
| || | | || |||||||| || || || || || || ||| |||||||||||||
Sbjct 27532 CTCGCTGCTTGTAGCTCCAATGCCCACGGCATCTACTGCCCAGATCATGGGTAATAATGA 27591
Query 76558 ATGCTTTGAACCATACACAACAAACATCTAC 76588
| |||||| || || || ||||||| |||
Sbjct 27592 GTCCTTTGAGCCGTATACTTCAAACATTTAC 27622
>seq735
Length=17191
Score = 91.5 bits (100), Expect = 2e-13
Identities = 173/251 (69%), Gaps = 8/251 (3%)
Strand=Plus/Plus
Query 14356 TATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAG-- 14413
||||| ||||| | |||||| ||| |||| || |||| | | || || ||||
Sbjct 11384 TATGGTAGATGGCTTAAAGCCTGGTCAGCGGAAGGTTATGTTTACGTGTTT---TAAGCG 11440
Query 14414 -AATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGC 14472
||| |||| |||| | ||||| || || ||| ||| | || || || | ||| |
Sbjct 11441 TAATGACAAGCGTGAAGTTAAGGTTGCCCAGCTGTCGGGTTCCGTTGCCGAAATGTCATC 11500
Query 14473 GTACCACCATGGTGAAGTATCCTTAGCGGAC-ACGATTGTTAAGTTGGCAAACGACTACA 14531
||| || ||||||||||| || | || | || ||||| || ||||| | ||||
Sbjct 11501 GTATCATCATGGTGAAGTCTCGCT-GCAAATGACCATTGTGAATTTGGCGCAGAACTATG 11559
Query 14532 CGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGG 14591
||| || ||||||||||| | | || || | |||||||| ||||| ||||||| |
Sbjct 11560 TGGGATCGAACAACATTAATTTGTTAGAGCCACGCGGTCAATTCGGTACTCGTCTCACCG 11619
Query 14592 GTGGTAAGGAT 14602
|||| || |||
Sbjct 11620 GTGGAAAAGAT 11630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596225789482400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |