Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq61 172 7e-38 seq735 91.5 2e-13 >seq61 Length=55249 Score = 172 bits (190), Expect = 7e-38 Identities = 642/991 (65%), Gaps = 23/991 (2%) Strand=Plus/Plus Query 75608 TACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGT 75667 ||| ||||||| |||||| |||||||| | |||||| | || | | ||| || Sbjct 26645 TACCTGGAACCTTGGCATTCCGATATCTTTGAGTTCTTGGACCTCAAAAAGAACACGGGC 26704 Query 75668 GACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCAT 75726 | |||||| | | | | | | |||||||| | || ||||||| || || || || || Sbjct 26705 AAGGAAGAG-CACAGAGCTCGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGTTTAT 26763 Query 75727 GAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCT 75786 |||||| || |||| || | ||||| || || ||||| ||||| || || | Sbjct 26764 GAAGCGTGTGGAGGCCAATGAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCGGCTT 26823 Query 75787 CTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTA 75845 |||| ||| || || ||||| || || |||||||| || ||| |||||| Sbjct 26824 GGAAGACGTTTGGGGGGATGACTTTGAGAAGCTGTATACAAAGTACGA-GAGCGAGGGTC 26882 Query 75846 GAGCCAATGCGACTGTACCAGCCGCCGA-TGTTTGGAAGGCTATTCTCAAATCACAGACG 75904 | || ||| || || | | | | | ||||| | || ||| | |||| || Sbjct 26883 GCGCAAAT-CGTGTGATTAAAGCACAAACTCTTTGGTATGCCATTGTTGAATCTCAAGTT 26941 Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964 |||||||| || || || ||||| | |||||| |||| |||| |||||| || || || Sbjct 26942 GAGACTGGCACTCCGTACATGCTCTTCAAGGACTCTTGCAACAGGAAGAGCAATCAGCAG 27001 Query 75965 AATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG 76024 ||| | || || ||||| || || || ||||| |||||| | || || | | Sbjct 27002 AATGTTGGCACCATCAAATGCAGCAACCTCTGCACTGAAATTGTTGAATATTCGGCACCC 27061 Query 76025 GATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAG 76084 ||||||| || || |||||||||||||| || ||| | | || ||| | | |||| Sbjct 27062 GATGAGATTGCCGTCTGCAATTTGGCATCGATAGCCTTGAATATGTTTGTGACTTCAGAG 27121 Query 76085 ACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTA 76144 | || || |||| | ||||| | ||| | || || | ||| |||| |||| | Sbjct 27122 A---AAACATTCGATTTCAAGAAACTGAAGGAAGTTACTAAAACTGTCACCAGAAATTTG 27178 Query 76145 AACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG---TCTAATATG 76201 ||| | ||||||| | |||| ||||| | | | | | |||| || ||| | Sbjct 27179 AACAAAATCATTGATATCAATTACTATCCGCT---GCCCGAGGCAAAGAAATCCAATTTA 27235 Query 76202 CGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC 76261 |||| | || ||||| | || ||||| || | || || | || ||| || || Sbjct 27236 AGACATCGTCCCATTGGCATTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCGT 27295 Query 76262 TACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTAT 76321 | | | ||| || ||||| | | ||| | ||||| |||||||| || Sbjct 27296 TTTCCCTATGAGAGTGACAAAGCCGTATTGCTCAATCAGCAGATCTTCGAAACCATCTAC 27355 Query 76322 CACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTT 76381 | | |||| ||||| |||||||| ||||| || | ||| ||||||| || | Sbjct 27356 TATGGTGCCCTTGAGGCCAGTTGTGAGCTGGCTCAAAAGGACGGTCCCTATGAAACCTAC 27415 Query 76382 GAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGA-AGGTGAAAC-CA 76439 | |||| ||| | | | | || | || |||| ||||||||||| | | | | || Sbjct 27416 GCTGGTTGTCCGGTGAGCAAGGGAATTCTGCAGTACGATATGTGGGACAAGACACCCACA 27475 Query 76440 AGCTCAACTACGACTGGGATGTTCTCAA--GGAACGCATCAAGGAGAAGGGTCTTCGTAA 76497 || | | || ||| || ||| || ||| ||||| ||| | || || | || Sbjct 27476 AG--CCTTTGGGATTGGACTGCTCTAAAATTGAA--AATCAAAGAGCATGGCGTTAGAAA 27531 Query 76498 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 76557 | || | | || |||||||| || || || || || || ||| ||||||||||||| Sbjct 27532 CTCGCTGCTTGTAGCTCCAATGCCCACGGCATCTACTGCCCAGATCATGGGTAATAATGA 27591 Query 76558 ATGCTTTGAACCATACACAACAAACATCTAC 76588 | |||||| || || || ||||||| ||| Sbjct 27592 GTCCTTTGAGCCGTATACTTCAAACATTTAC 27622 >seq735 Length=17191 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/251 (69%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 14356 TATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAG-- 14413 ||||| ||||| | |||||| ||| |||| || |||| | | || || |||| Sbjct 11384 TATGGTAGATGGCTTAAAGCCTGGTCAGCGGAAGGTTATGTTTACGTGTTT---TAAGCG 11440 Query 14414 -AATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGC 14472 ||| |||| |||| | ||||| || || ||| ||| | || || || | ||| | Sbjct 11441 TAATGACAAGCGTGAAGTTAAGGTTGCCCAGCTGTCGGGTTCCGTTGCCGAAATGTCATC 11500 Query 14473 GTACCACCATGGTGAAGTATCCTTAGCGGAC-ACGATTGTTAAGTTGGCAAACGACTACA 14531 ||| || ||||||||||| || | || | || ||||| || ||||| | |||| Sbjct 11501 GTATCATCATGGTGAAGTCTCGCT-GCAAATGACCATTGTGAATTTGGCGCAGAACTATG 11559 Query 14532 CGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGG 14591 ||| || ||||||||||| | | || || | |||||||| ||||| ||||||| | Sbjct 11560 TGGGATCGAACAACATTAATTTGTTAGAGCCACGCGGTCAATTCGGTACTCGTCTCACCG 11619 Query 14592 GTGGTAAGGAT 14602 |||| || ||| Sbjct 11620 GTGGAAAAGAT 11630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596225789482400