Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 127 4e-24 >SEQ10860 Length=7223 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||| || | || || || || |||| |||||| ||||| ||||| || Sbjct 1453 ACCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGA 1512 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | || || | || |||||||| || || ||||| || || | |||||| || || || Sbjct 1513 AAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGG 1572 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||||||||||| || || || || ||| ||||| || ||||| |||| ||| || Sbjct 1573 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGAC 1632 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| ||||| ||||| || | ||||||| ||| || ||||| Sbjct 1633 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904614358809000