Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021298.1
Length=51252
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32872 679 0.0
SEQ43235 113 1e-20
>SEQ32872
Length=2637
Score = 679 bits (752), Expect = 0.0
Identities = 1221/1760 (69%), Gaps = 53/1760 (3%)
Strand=Plus/Minus
Query 39012 AGACCCTTGCG-GGTTGCTCCGGTGGAGTCGAACGCACCGGCCTTGATCAAGGACTCGAT 39070
|| |||||||| || || ||| ||||||||| || ||||||||||||| || ||| |
Sbjct 1828 AGGCCCTTGCGCGGGTGG-CCGAGGGAGTCGAAGGCGCCGGCCTTGATCAGTGAGTCGGT 1770
Query 39071 GGCTCGCTTGCT-CA--CGGTCGCCTGAGTCGCTGCCTTC-AGGAAGTCCGGCAGGGAGG 39126
| | |||||| | || |||| || |||| | || ||| |||| | | | |
Sbjct 1769 GACGCGCTTGTTGCAGGCGGTGGC----GTCGATCTTGTCGAGGTAGTCGGAGAAGTCCG 1714
Query 39127 TGAACTTCCCCCAGGCTTCCCGGAGTTCGGCGATCTCCGCGACCATGCCCTCGCCCACGT 39186
||||||||||| | || || || |||| |||| | | ||||||| ||||
Sbjct 1713 TGAACTTCCCCTTCTCCTCGCGCGCCGCGATGATCGAGTCGACGACGTCCTCGCCGACGT 1654
Query 39187 TCTTCACGGCGGTCAGCCCGAAGCGGATCTCGTGCTCCCCGTTGGGGGTGAACGAGCTGT 39246
| || ||| || ||||||||||| || ||| ||| || ||| | | |
Sbjct 1653 TGCGGACCGCGCCGAGGCCGAAGCGGATGTC---CTCGCCGACGGACTGGAAGGTGTAGG 1597
Query 39247 TCGAGACCGACACGTC-GGGCGGCAGGACCCGAAGGCCCATGCGCCGAGACTCGCCGAGG 39305
|| | ||||| |||| | || || || | || | | | || | ||| |||||
Sbjct 1596 CGGACTCGTTGACGTCCGGGCTG-AGCACGCGCACCCCGAGGTGGCGGCAGTCGGCGAGG 1538
Query 39306 TACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCGCAGCCGCCATGTACTCG 39365
|| | || ||||| ||| | ||| |||||||||||||| |||||||||||||||
Sbjct 1537 TAGATCGCGGACTTGTCCTTCTTGTCCGCCACCGAGGTGAGCAGCGCCGCCATGTACTCG 1478
Query 39366 GCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAG 39425
|| | ||| ||| ||| || | || || | | | | || ||||| | || | |
Sbjct 1477 GCGGTGTAATGCTCCTTGAGGTAGGCGGTCCAGAAGCTCACCAGACCGTAGCCGGCGGCG 1418
Query 39426 TGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCTGGATG 39485
|||| |||||||| |||||||| |||||||| | || | |||||||| ||||||| |
Sbjct 1417 TGCGACTTGTTGAGCGCGTAGCCGGCGAACGGCAGCACCGTGTCCCACAGGGCCTGGACG 1358
Query 39486 GCACCGTCCGAGTAGCCTCGCTCGCGCGC-TCCCTTCTG-GAAGTTCACGAACTCCTTGG 39543
|| |||| |||||||| | | | | | || | | ||| || ||||||||||||
Sbjct 1357 GCCTCGTCGGAGTAGCC--GTTGGACTTCATGCCGGCGGCGAACTTGTCGAACTCCTTGG 1300
Query 39544 CCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGG 39603
|||| ||||||||||||||||||||||| ||| ||| | | |||||||| |||| ||
Sbjct 1299 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCCTTGCGGAACCCGTCGGCCTCACCGGCGG 1240
Query 39604 TGTA---CCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATGATGAGCT 39660
|||| | || || | ||||| | | || | |||||||||||| | ||||||
Sbjct 1239 TGTAGTTCGCGACCTT---CTGCGAGATCCTCATGATCTGCTCCTGGTACACGATGAGAC 1183
Query 39661 GGAAGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTGA 39720
| ||||| |||||||| ||| | ||||||||| | ||| |||||||||||| ||
Sbjct 1182 CGTAGGTCTCCTCCAGGATGTCCTTGATGGACTCGGCGAGCTCCGGGTGGATCGGCTCGA 1123
Query 39721 TCGCCTGCTGCCCGTTCTTACGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGAC 39780
||| || | |||||||| ||| ||||||| | ||| | ||| || |||||||| |
Sbjct 1122 TCGGCTTGCGGCCGTTCTTGCGGTCCGCGTAGTCCCAGTGCGCCCCGACACCCATCGGGC 1063
Query 39781 CCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAGAC 39840
|||| ||||||||||| | | ||| ||||| | |||| | ||||||| |
Sbjct 1062 CCGGCCGGTACAGCGCCAGGGACGCCACAATGTCGTTGAAGCCGGTGGGCTTCATGCGCT 1003
Query 39841 GGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGG 39900
||||||| |||| ||||| ||| |||||||||| ||||||||| || | ||
Sbjct 1002 TGAGCAGTTCCTGCATGCCGCCGGAGTCCAGCTGGAAGATGCCGAGCGTGTCACCGCGGG 943
Query 39901 CCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGACGTGCTCCC 39960
||||||| || || | ||| |||||||| | | |||||||||||||| || ||| |
Sbjct 942 CCAGCAGTTCATAGGACGCCGGGTCGTCGGTCGACAGGTTCTCCAGGTCGAAGTCCTCGC 883
Query 39961 CACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGA 40020
| ||||| ||||||||| | |||| | |||| |||||||| || ||||| |
Sbjct 882 CCCGGTTCTTCTTGATGTTCTCCAGGCAGTCGGCGATGACGGTGAGGTTGCGCAGCCCCA 823
Query 40021 GGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGT-CGAACTGCGTGATC 40079
|||||||||||||||||||||| | ||||| ||| ||||||| | | | | ||||||
Sbjct 822 GGAAGTCCATCTTCAGCAGGCCGATGGCCTCACAGGCCGGGTAGGGCCAGCCG-GTGATC 764
Query 40080 GTCGCGCCGTCCTGCGGTCGCACCCACACCGGGATGTGGTCGACCAGAGGCTCGTCGGAC 40139
|||||||| | || ||| ||||| |||||||||||||| ||| ||| | || |
Sbjct 763 AGGGCGCCGTCGTTGGGGCGCTTCCACATCGGGATGTGGTCGAGCAGCGGCACCGAGGCC 704
Query 40140 ATGATCACACCGGCTGCGTGCACACCCATCTGCCGGACGAGACCTTCGAGACCGAGCGCG 40199
|||||||| || ||||| | || ||| ||||| | || || || ||||| |||
Sbjct 703 ATGATCACTGCGCAGGCGTGGCCGCCGGCCTGGCGGACCACGCCCTCCAGGCCGAGGGCG 644
Query 40200 GTGTCGATGACCTCCTTGGCGTCCGGGTCGGAGCCGTAGATGCCCCGGATCTCGGCGGCC 40259
|||| || ||||||| | |||| |||| || || | |||||||| ||||||
Sbjct 643 TCGTCGTAGATCTCCTTGACCACCGGATCGGTCTCGATGAGGGTGCGGATCTCCGCGGCC 584
Query 40260 TCCTCGTACCGAGGGTGCTCGGCGTTGAAGATCCCGTCGAGGGGCATCGAGTTGCCCAT- 40318
| |||| || |||||||| | | | ||| || || || || | || || |
Sbjct 583 GCGCCGTAGCGCGGGTGCTCCGGATCCATGATGCC------GGACAGCGGGATGTCCTTC 530
Query 40319 --CACGTCGGCCGGGTAC---GCCTTGGTCAGCTTCTCGCCGACCTGGAA---GGGCT-- 40368
| | | |||||| | |||||||| | | ||| ||| |||||| |||||
Sbjct 529 GCCGCCTGCGCCGGGGGCAGGGCCTTGGTGATCCGGTCGGCGATCTGGAAGCCGGGCTGG 470
Query 40369 -TGTCCAGCACGCGGGCTGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGT-CCGTACGT 40426
|| | ||||||| |||||||| ||||| | | ||| | |||| ||| | ||
Sbjct 469 CCGTGGTGGGCGCGGGCGGCGTCCTTGATCGCCTGCTTGGTCTTCA-CCGTGCCGAAGGT 411
Query 40427 CGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGCC 40486
|| ||| ||||||||||| | || | ||| ||| | |||| |||||| ||||
Sbjct 410 GATGACCTGGGCGACCTTGTCCTCGCCCCAGTTCTGGGCGGCGTAGCGGATCATCTCG-- 353
Query 40487 ACGACGCCGGTCAT---CGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTT 40543
||||||||||| ||||||||||||||| |||||| ||| ||| || |||||
Sbjct 352 -GAACGCCGGTCATCGGCGAAGTCGATGTCGATATCGGGGGCGGAGGGGCGTTCCGGGTT 294
Query 40544 CAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGAC 40603
||||| |||||||| || || |||||||| | ||||||| || ||||||| || |
Sbjct 293 GAGGAATCGCTCGAACATCAGCCCGTGCTCGATGGGGTCGATGTTGGTGATCGTCAGTGC 234
Query 40604 GTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTC 40663
|||||||||||| | ||||| || ||||| || || |||||||| ||| |||| |
Sbjct 233 GTAGGCGACCAGGGCGCCGGCGGCGGAGCCACGGCCCGGGCCGACGGAGATGCCGATGGA 174
Query 40664 CTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGAT 40723
|| ||||| ||| ||||||||||||||||| |||||| ||||| || |
Sbjct 173 GCGGGCGTGCTTGATGAGGTCGGCGACGACGAGGAAGTAGGACGGGTAGCCCTTCATGTC 114
Query 40724 GATCATGTCGATCTCGTACT 40743
||| | |||||||||||
Sbjct 113 GATGACACTGATCTCGTACT 94
>SEQ43235
Length=559
Score = 113 bits (124), Expect = 1e-20
Identities = 177/251 (71%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 41096 GTGGGAATCGTTCGTGACCACCGGAGTGAGCGCGAGGTGCTTCCCGAGCCGGTACAGATC 41155
|||| | ||||| ||||||| ||| | ||| |||||| | |||| | | || ||
Sbjct 1 GTGGCAGTCGTTGGTGACCAGCGGCGGGAGGGCGAGGCGGCGTCCGATCTCGAGGAGGTC 60
Query 41156 CTCGCGGACCCGGCGCTCGATCTCGATGCCGTGGTCCATGAGTTCGAGCAGGTAGCGCTC 41215
|| |||||||| |||||| | ||||||||||||||| ||||| | |||| ||
Sbjct 61 GTCCCGGACCCGCTTCTCGATGGACAGGCCGTGGTCCATGAGCTCGAGGAAGTAGTTGTC 120
Query 41216 GCGACCCAGGATCTCCAGCCA-GTCGCCAGCGGCCCTGACTGCCTCGTCGTACTGACCCA 41274
||| || ||| ||| |||| ||||| |||||| || ||||||| | |||| || |
Sbjct 121 GCGGCCGTAGATGTCCTGCCATTTCGCC-GCGGCCTCGAGCGCCTCGTTGAACTGGCCGA 179
Query 41275 GGTTCAGCCTGGTCATGACTTCGCCACCAGGGCACCCCGTGGTTCCGATGATGCCCTCGC 41334
| ||||| |||| || ||||| ||||| || ||||| ||||| |||| |||
Sbjct 180 GCCGCAGCCGGGTCTGCACCTCGCCGGAGGGGCAGCCGGTGGTGGCGATGCTGCCGTCGG 239
Query 41335 TGCACTCGGCG 41345
| |||||||
Sbjct 240 CGTGCTCGGCG 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163795073584140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |