Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value SEQ45358 280 8e-71 SEQ44616 131 9e-26 >SEQ45358 Length=678 Score = 280 bits (310), Expect = 8e-71 Identities = 294/384 (77%), Gaps = 2/384 (1%) Strand=Plus/Minus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || |||||||||||| | || ||||| ||||| || ||||||||| ||||| ||||| Sbjct 396 GCGATCAACTGGAACACCATCCCGGACGAGAAGGACCTGGAGGTCTGGGACCGGCTGACC 337 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 |||||||||||||| |||||| | || | |||||||||||| | |||||||||| Sbjct 336 GGAAACTTCTGGCTGCCCGAGAAGGTGCCGCTGTCCAACGACATCAAGAGCTGGGGCACG 277 Query 59386 CTGACGGAGGAAGAGCAAGTCCTC-ACGATGCGGGTCTTCACCGGCCTGACGATGCTCGA 59444 || || |||| ||| ||| || | || ||||||||||||||||| ||||| ||||| || Sbjct 276 CTCACCGAGGCGGAG-AAGACCACCACCATGCGGGTCTTCACCGGTCTGACCATGCTGGA 218 Query 59445 CACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGA 59504 ||| |||||||||||||| ||||| ||||| ||| || | ||||||| ||||| Sbjct 217 CACCATCCAGGGCACCGTCGGTGCGACCAGCCTCATCGAGGATTCCGTCACGCCCCACGA 158 Query 59505 GGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAA 59564 ||||||||||| ||| |||||||| ||||||||||| |||||||||| | |||| Sbjct 157 GGAGGCGGTGTTCACCAACATCGCCTTCATGGAGTCCGTGCACGCGACGTCCTACTCGTC 98 Query 59565 CATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGA 59624 |||||| | |||| ||| || | | || |||| || ||||||||||||||| Sbjct 97 GATCTTCATGCCGCTCGCCTCCGCCCCGCCGCTCCACGCCGCCTTCCGCTGGTCGGAGTC 38 Query 59625 GAATCCGAACCTGCAACGCAAGGC 59648 | | || |||||| ||||||| Sbjct 37 GTCCCAGACCCTGCAGAGCAAGGC 14 >SEQ44616 Length=1890 Score = 131 bits (144), Expect = 9e-26 Identities = 162/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 59272 AACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACCAACAAC 59331 ||||||||||| || ||| |||||| || ||||||||| | ||| | |||| |||| Sbjct 225 AACTGGAACCGGATCACCGACCCCAAGGACCTCGAGGTCTGGCAGCGGCTCACCAGCAAC 166 Query 59332 TTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGG--GGCACGCTGA 59389 |||||| |||| ||||| | || | ||||| ||| | || | |||| ||||| | | Sbjct 165 TTCTGGTTGCCGGAGAAAGTGCCGCTGTCCAATGACCTGCCCGACTGGCGGGCACTCGGC 106 Query 59390 CGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGACACGA 59449 || || || | |||||| | |||||||||||||| |||||| |||| |||||| Sbjct 105 --GACGAGGACCGCACCCTCACCACCCGGGTCTTCACCGGGCTGACGCTGCTGGACACGG 48 Query 59450 TCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGC 59489 |||||| |||||| || || | |||| | |||| || || Sbjct 47 TCCAGGCCACCGTCGGAGCGCTCAGCCAGCTCCCGGATGC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258785705344980