Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021304.1
Length=51552
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32872 675 0.0
SEQ43235 93.3 1e-14
>SEQ32872
Length=2637
Score = 675 bits (748), Expect = 0.0
Identities = 1220/1760 (69%), Gaps = 53/1760 (3%)
Strand=Plus/Minus
Query 39300 AGACCCTTGCG-GGTTGCTCCGGTGGAGTCGAACGCACCGGCCTTGATCAAGGACTCGAT 39358
|| |||||||| || || ||| ||||||||| || ||||||||||||| || ||| |
Sbjct 1828 AGGCCCTTGCGCGGGTGG-CCGAGGGAGTCGAAGGCGCCGGCCTTGATCAGTGAGTCGGT 1770
Query 39359 GGCTCGCTTGCT-CA--CGGTCGCCTGAGTCGCTGCCTTC-AGGAAGTCCGGCAGGGAGG 39414
| | |||||| | || |||| || |||| | || ||| |||| | | | |
Sbjct 1769 GACGCGCTTGTTGCAGGCGGTGGC----GTCGATCTTGTCGAGGTAGTCGGAGAAGTCCG 1714
Query 39415 TGAACTTCCCCCAGGCTTCCCGGAGTTCGGCGATCTCCGCGACCATGCCCTCGCCCACGT 39474
||||||||||| | || || || |||| |||| | | ||||||| ||||
Sbjct 1713 TGAACTTCCCCTTCTCCTCGCGCGCCGCGATGATCGAGTCGACGACGTCCTCGCCGACGT 1654
Query 39475 TCTTCACGGCGGTCAGCCCGAAGCGGATCTCGTGCTCCCCGTTGGGGGTGAACGAGCTGT 39534
| || ||| || ||||||||||| || ||| ||| || ||| | | |
Sbjct 1653 TGCGGACCGCGCCGAGGCCGAAGCGGATGTC---CTCGCCGACGGACTGGAAGGTGTAGG 1597
Query 39535 TCGAGACCGACACGTC-GGGCGGCAGGACCCGCAGGCCCATGCGCCGAGACTCGCCGAGG 39593
|| | ||||| |||| | || || |||| || | | | || | ||| |||||
Sbjct 1596 CGGACTCGTTGACGTCCGGGCTG-AGCACGCGCACCCCGAGGTGGCGGCAGTCGGCGAGG 1538
Query 39594 TACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCGCAGCCGCCATGTACTCG 39653
|| | || ||||| ||| | ||| |||||||||||||| |||||||||||||||
Sbjct 1537 TAGATCGCGGACTTGTCCTTCTTGTCCGCCACCGAGGTGAGCAGCGCCGCCATGTACTCG 1478
Query 39654 GCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAG 39713
|| | ||| ||| ||| || | || || | | | | || ||||| | || | |
Sbjct 1477 GCGGTGTAATGCTCCTTGAGGTAGGCGGTCCAGAAGCTCACCAGACCGTAGCCGGCGGCG 1418
Query 39714 TGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCTGGATG 39773
|||| |||||||| |||||||| |||||||| | || | |||||||| ||||||| |
Sbjct 1417 TGCGACTTGTTGAGCGCGTAGCCGGCGAACGGCAGCACCGTGTCCCACAGGGCCTGGACG 1358
Query 39774 GCACCGTCCGAGTAGCCTCGCTCGCGCGC-TCCCTTCTG-GAAGTTCACGAACTCCTTGG 39831
|| |||| |||||||| | | | | | || | | ||| || ||||||||||||
Sbjct 1357 GCCTCGTCGGAGTAGCC--GTTGGACTTCATGCCGGCGGCGAACTTGTCGAACTCCTTGG 1300
Query 39832 CCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGG 39891
|||| ||||||||||||||||||||||| ||| ||| | | |||||||| |||| ||
Sbjct 1299 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCCTTGCGGAACCCGTCGGCCTCACCGGCGG 1240
Query 39892 TGTA---CCCGGCCATGACCTGTGCAACCTTCTGCACTTGCTCCTGGTAGATGATGAGCT 39948
|||| | || || | ||| | | | || | ||||||||||| | ||||||
Sbjct 1239 TGTAGTTCGCGACCTT---CTGCGAGATCCTCATGATCTGCTCCTGGTACACGATGAGAC 1183
Query 39949 GGAAGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTGA 40008
| ||||| |||||||| ||| | ||||||||| | ||| |||||||||||| ||
Sbjct 1182 CGTAGGTCTCCTCCAGGATGTCCTTGATGGACTCGGCGAGCTCCGGGTGGATCGGCTCGA 1123
Query 40009 TCGCCTGCTGCCCGTTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGAC 40068
||| || | |||||||| ||| ||||||| | ||| | ||| || |||||||| |
Sbjct 1122 TCGGCTTGCGGCCGTTCTTGCGGTCCGCGTAGTCCCAGTGCGCCCCGACACCCATCGGGC 1063
Query 40069 CAGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAGAC 40128
| || ||||||||||| | | ||| ||||| | |||| | ||||||| |
Sbjct 1062 CCGGCCGGTACAGCGCCAGGGACGCCACAATGTCGTTGAAGCCGGTGGGCTTCATGCGCT 1003
Query 40129 GGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGG 40188
||||||| |||| ||||| ||| |||||||||| ||||||||| || | ||
Sbjct 1002 TGAGCAGTTCCTGCATGCCGCCGGAGTCCAGCTGGAAGATGCCGAGCGTGTCACCGCGGG 943
Query 40189 CCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGACGTGCTCCC 40248
||||||| || || | ||| |||||||| | | |||||||||||||| || ||| |
Sbjct 942 CCAGCAGTTCATAGGACGCCGGGTCGTCGGTCGACAGGTTCTCCAGGTCGAAGTCCTCGC 883
Query 40249 CACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGA 40308
| ||||| ||||||||| | |||| | |||| |||||||| || ||||| |
Sbjct 882 CCCGGTTCTTCTTGATGTTCTCCAGGCAGTCGGCGATGACGGTGAGGTTGCGCAGCCCCA 823
Query 40309 GGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGT-CGAACTGCGTGATC 40367
|||||||||||||||||||||| | ||||| ||| ||||||| | | | | ||||||
Sbjct 822 GGAAGTCCATCTTCAGCAGGCCGATGGCCTCACAGGCCGGGTAGGGCCAGCCG-GTGATC 764
Query 40368 GTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGACCAGCGGCTCGTCGGAC 40427
|||||||| | || || ||||| |||||||||||||| ||||||| | || |
Sbjct 763 AGGGCGCCGTCGTTGGGGCGCTTCCACATCGGGATGTGGTCGAGCAGCGGCACCGAGGCC 704
Query 40428 ATGATCACACCGGCTGCGTGCACACCCATCTGCCGGACGAGACCTTCGAGACCGAGCGCG 40487
|||||||| || ||||| | || ||| ||||| | || || || ||||| |||
Sbjct 703 ATGATCACTGCGCAGGCGTGGCCGCCGGCCTGGCGGACCACGCCCTCCAGGCCGAGGGCG 644
Query 40488 GTGTCGATGACCTCCTTGGCGTCCGGGTCGGAGCCGTAGATGCCCCGGATCTCGGCGGCC 40547
|||| || ||||||| | |||| |||| || || | |||||||| ||||||
Sbjct 643 TCGTCGTAGATCTCCTTGACCACCGGATCGGTCTCGATGAGGGTGCGGATCTCCGCGGCC 584
Query 40548 TCCTCGTACCGAGGGTGCTCGGCGTTGAAGATCCCGTCGAGGGGCATCGAGTTGCCCAT- 40606
| |||| || |||||||| | | | ||| || || || || | || || |
Sbjct 583 GCGCCGTAGCGCGGGTGCTCCGGATCCATGATGCC------GGACAGCGGGATGTCCTTC 530
Query 40607 --CACGTCGGCCGGGTAC---GCCTTGGTCAGCTTCTCGCCGACCTGGAA---GGGCT-- 40656
| | | |||||| | |||||||| | | ||| ||| |||||| |||||
Sbjct 529 GCCGCCTGCGCCGGGGGCAGGGCCTTGGTGATCCGGTCGGCGATCTGGAAGCCGGGCTGG 470
Query 40657 -TGTCCAGCACGCGGGCTGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGT-CCGTACGT 40714
|| | ||||||| |||||||| ||||| | | ||| | |||| ||| | ||
Sbjct 469 CCGTGGTGGGCGCGGGCGGCGTCCTTGATCGCCTGCTTGGTCTTCA-CCGTGCCGAAGGT 411
Query 40715 CGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGCC 40774
|| ||| ||||||||||| | || | ||| ||| | |||| |||||| ||||
Sbjct 410 GATGACCTGGGCGACCTTGTCCTCGCCCCAGTTCTGGGCGGCGTAGCGGATCATCTCG-- 353
Query 40775 ACGACGCCGGTCAT---CGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTT 40831
||||||||||| ||||||||||||||| |||||| ||| ||| || |||||
Sbjct 352 -GAACGCCGGTCATCGGCGAAGTCGATGTCGATATCGGGGGCGGAGGGGCGTTCCGGGTT 294
Query 40832 CAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGAC 40891
||||| |||||||| || ||||||||||| | ||||||| || ||||||| || |
Sbjct 293 GAGGAATCGCTCGAACATCAGCCCGTGCTCGATGGGGTCGATGTTGGTGATCGTCAGTGC 234
Query 40892 GTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTC 40951
|||||||||||| | ||||| || ||||| || || |||||||| ||| |||| |
Sbjct 233 GTAGGCGACCAGGGCGCCGGCGGCGGAGCCACGGCCCGGGCCGACGGAGATGCCGATGGA 174
Query 40952 CTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGAT 41011
|| ||||| ||| ||||||||||||||||| |||||| ||||| || |
Sbjct 173 GCGGGCGTGCTTGATGAGGTCGGCGACGACGAGGAAGTAGGACGGGTAGCCCTTCATGTC 114
Query 41012 GATCATGTCGATCTCGTACT 41031
||| | |||||||||||
Sbjct 113 GATGACACTGATCTCGTACT 94
>SEQ43235
Length=559
Score = 93.3 bits (102), Expect = 1e-14
Identities = 174/253 (69%), Gaps = 6/253 (2%)
Strand=Plus/Plus
Query 41384 GTGGGAATCGTTCGTGACCACCGGAGTGAGCGCGAGGTGCTTCCCGAGCCGGTACAGATC 41443
|||| | ||||| ||||||| ||| | ||| |||||| | |||| | | || ||
Sbjct 1 GTGGCAGTCGTTGGTGACCAGCGGCGGGAGGGCGAGGCGGCGTCCGATCTCGAGGAGGTC 60
Query 41444 CTCGCGGACCCGGCGCTCGATCTCGATGCCGTGGTCCATCAGCTCCAGGAAGTACCGGTC 41503
|| |||||||| |||||| | |||||||||||| ||||| |||||||| |||
Sbjct 61 GTCCCGGACCCGCTTCTCGATGGACAGGCCGTGGTCCATGAGCTCGAGGAAGTAGTTGTC 120
Query 41504 ACGCCCGAAGACCTCCAG--GTACCGAC-CGGCCTCCTTCACGGCCTCGTCGTACTGCCC 41560
|| ||| ||| ||| | | || | ||||||| | ||||||| | |||| ||
Sbjct 121 GCGGCCGTAGATGTCCTGCCATTTCGCCGCGGCCTC---GAGCGCCTCGTTGAACTGGCC 177
Query 41561 GAGGTTCAGCCGGGTCATGATCGCACCGCCAGGACATCCGGTCGTGACGACCAGGCCCTC 41620
||| |||||||||| | | | ||| || || ||||| ||| ||| ||| ||
Sbjct 178 GAGCCGCAGCCGGGTCTGCACCTCGCCGGAGGGGCAGCCGGTGGTGGCGATGCTGCCGTC 237
Query 41621 GTTGTGCTCGGCG 41633
| ||||||||||
Sbjct 238 GGCGTGCTCGGCG 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164754547987140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |