Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021305.1
Length=76179
Score E
Sequences producing significant alignments: (Bits) Value
SEQ13951 444 3e-120
SEQ32968 147 1e-30
SEQ22413 147 1e-30
>SEQ13951
Length=2429
Score = 444 bits (492), Expect = 3e-120
Identities = 592/817 (72%), Gaps = 9/817 (1%)
Strand=Plus/Minus
Query 65750 TATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAAT 65809
|||||| | ||| ||| || |||||||| |||| |||| ||||||| || || || ||
Sbjct 1968 TATCGCGATCAACGTCGCGCTCGGCATCGGCGGGTTCCCGCGGGGCCGTGTCGTCGAGAT 1909
Query 65810 CTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCA 65869
|||||| || || || || || ||| | || || || ||||| || ||| | |||||
Sbjct 1908 CTACGGTCCGGAGTCCTCGGGTAAGACCACGGTGGCGCTGCACGCTGTCGCCGAGGCGCA 1849
Query 65870 GAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGC 65929
||||| ||| |||| |||||||| ||||||||| |||||| |||| ||||| ||||||||
Sbjct 1848 GAAGGGCGGCGGCATCGCCGCCTTCATCGACGCGGAGCACGCCCTCGACCCCGAGTACGC 1789
Query 65930 CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCA 65989
||| ||||| |||||| ||||||||| | || ||||||||||| ||||||||
Sbjct 1788 GAAGAACCTCGGGGTGGACACGGACAACCTCCTCGTCTCCCAGCCGGACACCGGCGAGCA 1729
Query 65990 GGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGA 66049
||| || ||||||| ||| | |||||| ||| |||| | | |||| |||| || ||
Sbjct 1728 GGCACTCGAGATCGCCGACATGCTCGTCCGGTCGGGCGCGGTCGACATCATCGTGGTGGA 1669
Query 66050 CTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGT 66109
||| || ||||| ||| ||| || ||| |||| || || || || |||||||||||
Sbjct 1668 CTCGGTCGCGGCGCTGACCCCGAAGGCGGAGATCGAGGGGGAGATGGGCGACAGTCACGT 1609
Query 66110 CGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATC-TCCA 66168
||| ||||| || ||||||||| ||||| |||||||| | || || | || |||
Sbjct 1608 CGGTCTGCAGGCCCGCCTCATGAGCCAGGCACTGCGCAAGATGACCGGTGCACTCAGCCA 1549
Query 66169 GCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCT 66228
| ||| ||| | ||| |||||||| | |||||||||||||| |||| |
Sbjct 1548 G-ACCGGCACCACCGCCATCTTCATCAACCAGCTCCGCGAGAAGATCGG---CGTGATGT 1493
Query 66229 ACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCA 66288
||| || |||||||| |||||||||||||| ||| ||||||||| || ||||||
Sbjct 1492 TCGGTTCGCCGGAGACCACGACGGGCGGCAAGGCACTGAAGTTCTACGCTTCGGTCCGCT 1433
Query 66289 TGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCC 66348
|| |||| || || || ||||| || | || || ||||| ||||| |||
Sbjct 1432 GCGACATCCGGCGGGTCCAGACGCTCAAGGACGGGCAGGATGCGGTCGGTAACCGGACCA 1373
Query 66349 GGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCG 66408
| ||||| |||||||||||||| | | |||||| | | |||||| ||| |||
Sbjct 1372 AGATGAAGATCGTCAAGAACAAGGTCTCGCCGCCGTTCAAGATCGCCGAATTCGATGTCC 1313
Query 66409 TGTACGGGGAGGGCATCTCGCGTGA--GGTCGAACTCCTCGACCTGGCCGTGTCGCAGGG 66466
| ||||| |||||||||| || || |||||| || ||||||||| |||| | ||
Sbjct 1312 TCTACGGACAGGGCATCTCCCGGGAAGGGTCGA--TCATCGACCTGGGCGTGGACAACGG 1255
Query 66467 CCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAA 66526
||| | |||||||| ||| |||||| || ||| || | | | | | ||||||||
Sbjct 1254 ACTGATCAAGAAGTCCGGCTCCTGGTACACCTACAAGGGCGACCAGCTGGGGCAGGGCAA 1195
Query 66527 GCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGAC 66563
| |||||| | ||| ||||||| |||||||||
Sbjct 1194 GGAGAAGGCCCGCGAGTTCCTCAAGGAGAACCCGGAC 1158
>SEQ32968
Length=2597
Score = 147 bits (162), Expect = 1e-30
Identities = 238/336 (71%), Gaps = 11/336 (3%)
Strand=Plus/Minus
Query 60181 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 60240
||||||||| ||| || ||| || || ||| ||| | |||| ||| ||||
Sbjct 2172 TCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCCAGTGGCGCGGCGGTCG 2113
Query 60241 CCAACTTCACCGTCGTGTCCAACGAACGCCGCCG---CGACGCCCAAGGC-AAC---TGG 60293
| |||||| ||||| ||| |||| | ||| || |||| | ||| | ||| |||
Sbjct 2112 CGAACTTCCGCGTCGCGTC-AACG--CCCCGTCGGTTCGACTCG-AAGTCGAACCAGTGG 2057
Query 60294 GTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTA 60353
|||||||| || || |||||| |||||| | |||||||| | ||||||||||||||
Sbjct 2056 GTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCCGCCGAGAACGTC 1997
Query 60354 GCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCC 60413
||| | ||| || || || | ||||| ||||| ||| || ||||| |||
Sbjct 1996 GCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGCTGCGCCAGCGGTCC 1937
Query 60414 TTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGC 60473
| ||| ||| ||||| || ||||||||||| ||||||||||||| |||||| |||||
Sbjct 1936 TACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTCGACGAGGTCGGC 1877
Query 60474 CCGTCGCTGCGGTGGGCAACAGCTCGTGTGTCCAAG 60509
||||| || |||| || || || | || |||||
Sbjct 1876 CCGTCTCTCCGGTACGCCACCGCACAGGTCGCCAAG 1841
>SEQ22413
Length=7522
Score = 147 bits (162), Expect = 1e-30
Identities = 220/311 (71%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 60181 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 60240
||||||||| ||| || ||||||||| |||| | ||||| | || || |||
Sbjct 3674 TCGTCGGCAACCTCGTGGCGGACCCCGAGTTGCGCTACACCCCCAGCGGTGCCGCGGTCA 3615
Query 60241 CCAACTTCACCGTCGTGTCCAACGAACGCCGCCGCGACGCCCAAGGCAAC---TGGGTCG 60297
|||||||| || | |||| || ||| |||| | || |||| |||||||
Sbjct 3614 CCAACTTCCGGGTGGCTTCCACACCGCGACGCTTCGACTCACAGACCAACCAGTGGGTCG 3555
Query 60298 ACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGCGG 60357
||| ||| ||| ||||| ||||| |||||||||| ||||||||||||||| ||
Sbjct 3554 ACGACGAGGCCTTGTTCCTGACCTGCAACATCTGGCGCACCGCCGCCGAGAACGTCGCCA 3495
Query 60358 AAAGCCTCCAGAAAGGCCAGCGCGTCATCGT----GCATGGCTACCTCAAGCAGCGCTCC 60413
| ||||| || || ||| | || || ||||| | || | | |||| || |||
Sbjct 3494 ACAGCCTGCACAAGGGCGACCGGGTGATCGTCACCGGCCGGTTGCGTCAA----CGGTCC 3439
Query 60414 TTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGC 60473
| ||||||| ||||| || ||||||||||| ||||||||||| |||||| |||||
Sbjct 3438 TACGAGACCCGCGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGACCGACGAGGTCGGC 3379
Query 60474 CCGTCGCTGCG 60484
|| ||||||||
Sbjct 3378 CCCTCGCTGCG 3368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 243511093046700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |