Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021306.1
Length=75736
Score E
Sequences producing significant alignments: (Bits) Value
SEQ13951 450 7e-122
SEQ32968 147 1e-30
SEQ22413 147 1e-30
>SEQ13951
Length=2429
Score = 450 bits (498), Expect = 7e-122
Identities = 593/817 (73%), Gaps = 9/817 (1%)
Strand=Plus/Minus
Query 65083 TATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAAT 65142
|||||| | ||| ||| || |||||||| |||| |||| ||||||| || || || ||
Sbjct 1968 TATCGCGATCAACGTCGCGCTCGGCATCGGCGGGTTCCCGCGGGGCCGTGTCGTCGAGAT 1909
Query 65143 CTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCA 65202
|||||| || || || || || ||| | || || || ||||| || ||| | |||||
Sbjct 1908 CTACGGTCCGGAGTCCTCGGGTAAGACCACGGTGGCGCTGCACGCTGTCGCCGAGGCGCA 1849
Query 65203 GAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGC 65262
||||| ||| |||| |||||||| ||||||||| |||||| |||| ||||| ||||||||
Sbjct 1848 GAAGGGCGGCGGCATCGCCGCCTTCATCGACGCGGAGCACGCCCTCGACCCCGAGTACGC 1789
Query 65263 CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCA 65322
||| ||||| |||||| ||||||||| | || ||||||||||| ||||||||
Sbjct 1788 GAAGAACCTCGGGGTGGACACGGACAACCTCCTCGTCTCCCAGCCGGACACCGGCGAGCA 1729
Query 65323 GGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGA 65382
||| || ||||||| ||| | |||||| ||| |||| | | |||| |||| || ||
Sbjct 1728 GGCACTCGAGATCGCCGACATGCTCGTCCGGTCGGGCGCGGTCGACATCATCGTGGTGGA 1669
Query 65383 CTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGT 65442
||| || ||||| ||| ||| || ||| |||| || || || || |||||||||||
Sbjct 1668 CTCGGTCGCGGCGCTGACCCCGAAGGCGGAGATCGAGGGGGAGATGGGCGACAGTCACGT 1609
Query 65443 CGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATC-TCCA 65501
||| ||||| || ||||||||| ||||| |||||||| | ||||| | || |||
Sbjct 1608 CGGTCTGCAGGCCCGCCTCATGAGCCAGGCACTGCGCAAGATGACCGGTGCACTCAGCCA 1549
Query 65502 GCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCT 65561
| ||| ||| | ||| |||||||| | |||||||||||||| |||| |
Sbjct 1548 G-ACCGGCACCACCGCCATCTTCATCAACCAGCTCCGCGAGAAGATCGG---CGTGATGT 1493
Query 65562 ACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCA 65621
||| || |||||||| |||||||||||||| ||| ||||||||| || ||||||
Sbjct 1492 TCGGTTCGCCGGAGACCACGACGGGCGGCAAGGCACTGAAGTTCTACGCTTCGGTCCGCT 1433
Query 65622 TGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCC 65681
|| |||| || || || ||||| || | || || ||||| ||||| |||
Sbjct 1432 GCGACATCCGGCGGGTCCAGACGCTCAAGGACGGGCAGGATGCGGTCGGTAACCGGACCA 1373
Query 65682 GGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCG 65741
| ||||| |||||||||||||| | | |||||| | | |||||| ||| |||
Sbjct 1372 AGATGAAGATCGTCAAGAACAAGGTCTCGCCGCCGTTCAAGATCGCCGAATTCGATGTCC 1313
Query 65742 TGTACGGGGAGGGCATCTCGCGTGA--GGTCGAACTCCTCGACCTGGCCGTGTCGCAGGG 65799
| ||||| |||||||||| || || |||||| || ||||||||| |||| | ||
Sbjct 1312 TCTACGGACAGGGCATCTCCCGGGAAGGGTCGA--TCATCGACCTGGGCGTGGACAACGG 1255
Query 65800 CCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAA 65859
||| | |||||||| ||| |||||| || ||| || | | | | | ||||||||
Sbjct 1254 ACTGATCAAGAAGTCCGGCTCCTGGTACACCTACAAGGGCGACCAGCTGGGGCAGGGCAA 1195
Query 65860 GCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGAC 65896
| |||||| | ||| ||||||| |||||||||
Sbjct 1194 GGAGAAGGCCCGCGAGTTCCTCAAGGAGAACCCGGAC 1158
>SEQ32968
Length=2597
Score = 147 bits (162), Expect = 1e-30
Identities = 238/336 (71%), Gaps = 11/336 (3%)
Strand=Plus/Minus
Query 59514 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 59573
||||||||| ||| || ||| || || ||| ||| | |||| ||| ||||
Sbjct 2172 TCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCCAGTGGCGCGGCGGTCG 2113
Query 59574 CCAACTTCACCGTCGTGTCCAACGAACGCCGCCG---CGACGCCCAAGGC-AAC---TGG 59626
| |||||| ||||| ||| |||| | ||| || |||| | ||| | ||| |||
Sbjct 2112 CGAACTTCCGCGTCGCGTC-AACG--CCCCGTCGGTTCGACTCG-AAGTCGAACCAGTGG 2057
Query 59627 GTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTA 59686
|||||||| || || |||||| |||||| | |||||||| | ||||||||||||||
Sbjct 2056 GTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCCGCCGAGAACGTC 1997
Query 59687 GCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCC 59746
||| | ||| || || || | ||||| ||||| ||| || ||||| |||
Sbjct 1996 GCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGCTGCGCCAGCGGTCC 1937
Query 59747 TTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGC 59806
| ||| ||| ||||| || ||||||||||| ||||||||||||| |||||| |||||
Sbjct 1936 TACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTCGACGAGGTCGGC 1877
Query 59807 CCGTCGCTGCGGTGGGCAACAGCTCGCGTGTCCAAG 59842
||||| || |||| || || || | || |||||
Sbjct 1876 CCGTCTCTCCGGTACGCCACCGCACAGGTCGCCAAG 1841
>SEQ22413
Length=7522
Score = 147 bits (162), Expect = 1e-30
Identities = 220/311 (71%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 59514 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 59573
||||||||| ||| || ||||||||| |||| | ||||| | || || |||
Sbjct 3674 TCGTCGGCAACCTCGTGGCGGACCCCGAGTTGCGCTACACCCCCAGCGGTGCCGCGGTCA 3615
Query 59574 CCAACTTCACCGTCGTGTCCAACGAACGCCGCCGCGACGCCCAAGGCAAC---TGGGTCG 59630
|||||||| || | |||| || ||| |||| | || |||| |||||||
Sbjct 3614 CCAACTTCCGGGTGGCTTCCACACCGCGACGCTTCGACTCACAGACCAACCAGTGGGTCG 3555
Query 59631 ACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGCGG 59690
||| ||| ||| ||||| ||||| |||||||||| ||||||||||||||| ||
Sbjct 3554 ACGACGAGGCCTTGTTCCTGACCTGCAACATCTGGCGCACCGCCGCCGAGAACGTCGCCA 3495
Query 59691 AAAGCCTCCAGAAAGGCCAGCGCGTCATCGT----GCATGGCTACCTCAAGCAGCGCTCC 59746
| ||||| || || ||| | || || ||||| | || | | |||| || |||
Sbjct 3494 ACAGCCTGCACAAGGGCGACCGGGTGATCGTCACCGGCCGGTTGCGTCAA----CGGTCC 3439
Query 59747 TTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGC 59806
| ||||||| ||||| || ||||||||||| ||||||||||| |||||| |||||
Sbjct 3438 TACGAGACCCGCGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGACCGACGAGGTCGGC 3379
Query 59807 CCGTCGCTGCG 59817
|| ||||||||
Sbjct 3378 CCCTCGCTGCG 3368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242094289602785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |