Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_021310.1 Length=68598 Score E Sequences producing significant alignments: (Bits) Value seq2825 141 4e-29 >seq2825 Length=19190 Score = 141 bits (156), Expect = 4e-29 Identities = 285/418 (68%), Gaps = 8/418 (2%) Strand=Plus/Minus Query 45986 GGTGGGCCGGGCCAGCACGACGCAGTCACACATCGGGAAATCGGCACCCTCGGTGAGCAC 46045 ||| || || ||||||||||| |||||||| ||||| || || |||||||||||||| Sbjct 6612 GGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGTCCGCGCCCTCGGTGAGCAC 6553 Query 46046 CTGCACAGTGACCAGCGCCTTGGCGGTGCCGTTTCGGTACGCCTCGTATACGGGCTGGCG 46105 |||||||||||||| ||| | |||| | ||| || ||| | ||| || Sbjct 6552 CTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGGAACTGGCGGTAGATTTCCTGCCG 6493 Query 46106 CTCGGCGTAGCTCATCGAGCCGGTGACGGCGACGGCG-GGGAAATCGGCG-GCGGTCAGT 46163 ||| || | ||| ||||| || |||| | | ||| | | ||| ||||| || Sbjct 6492 CTCCGCCTTGCTGTGGCTGCCGGACAC--CGACCGGGTGGGGTAGCCGCGCGCGGTGAGC 6435 Query 46164 GCGTCGGCGATGTGGTGGGCNNCGTCGACCGACGCGGCGAAGATGATCGGGCGGCGGTCG 46223 || |||| | | | | | ||||| ||| ||||||||||||||||| ||||||| Sbjct 6434 TCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGAAGATGATCGGGACGCGGTCG 6375 Query 46224 GCGGCGTGCAGCTTGATCGCGTCGACCACGTACTCGG--TGGCGGCTTCCATGACCTCGG 46281 |||||||| | | |||||||| || |||| | | ||| |||||||||| Sbjct 6374 GCGGCGTGGCGGAGCACGGCGTCGAC--GGTGGTCGGGATCGAGGCACGCATGACCTCGT 6317 Query 46282 CGAGGTCGGACTGCTGGAAATCACCGGCGACGGTGCGCACGTCATCGAGGGCGTTGAGGT 46341 | ||||||||||| | | | || ||| |||| || | ||||| ||| |||| Sbjct 6316 CCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCCGGGCGAGGAGGTTCAGGT 6257 Query 46342 TCTTGATGCGGACGGTCAGACCGCGCGGGCGCACGAGGTAGCCAGAGTCGATGGCCCA 46399 || | || |||||||| ||||| || | |||||| | || |||||| ||||| Sbjct 6256 GCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACCCGTTGTCGATCGCCCA 6199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 219265524404895