Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021324.1
Length=53369
Score E
Sequences producing significant alignments: (Bits) Value
SEQ24884 87.8 6e-13
SEQ25496 80.6 9e-11
>SEQ24884
Length=1939
Score = 87.8 bits (96), Expect = 6e-13
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 47238 CGATCCGCGAGGCCGTTGGTACCGCCGTTGATCCGGCGGGTGACCGTGTTCAGGTCG-CG 47296
|| ||||| ||||||||||| |||||||||||| |||||||| | | || |
Sbjct 1052 CGGTCCGCCAGGCCGTTGGTTCCGCCGTTGATCGACCGGGTGACGGCCACGACATCATCC 1111
Query 47297 GCGATCGGACAGCTCGTTGATGTCCGGGCGGGCGACCGTCCAGTACCAGG 47346
|| |||| || || |||||| || ||||||||||||||||||||||||||
Sbjct 1112 GC-ATCGCACTGCGCGTTGAGGTTCGGGCGGGCGACCGTCCAGTACCAGG 1160
>SEQ25496
Length=2929
Score = 80.6 bits (88), Expect = 9e-11
Identities = 52/56 (93%), Gaps = 1/56 (2%)
Strand=Plus/Minus
Query 51146 CAGGACTCGAACCTGCAACCGGCGGTTTTGGAGACCGCTGCTCTACCAAATTGAGC 51201
||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct 461 CAGGACTTGAACCTGCAACCTGCGGTTTTGGAGACCGCTGCTCTGCC-AATTGAGC 407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170565764621310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |