Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_021324.1 Length=53369 Score E Sequences producing significant alignments: (Bits) Value SEQ24884 87.8 6e-13 SEQ25496 80.6 9e-11 >SEQ24884 Length=1939 Score = 87.8 bits (96), Expect = 6e-13 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 47238 CGATCCGCGAGGCCGTTGGTACCGCCGTTGATCCGGCGGGTGACCGTGTTCAGGTCG-CG 47296 || ||||| ||||||||||| |||||||||||| |||||||| | | || | Sbjct 1052 CGGTCCGCCAGGCCGTTGGTTCCGCCGTTGATCGACCGGGTGACGGCCACGACATCATCC 1111 Query 47297 GCGATCGGACAGCTCGTTGATGTCCGGGCGGGCGACCGTCCAGTACCAGG 47346 || |||| || || |||||| || |||||||||||||||||||||||||| Sbjct 1112 GC-ATCGCACTGCGCGTTGAGGTTCGGGCGGGCGACCGTCCAGTACCAGG 1160 >SEQ25496 Length=2929 Score = 80.6 bits (88), Expect = 9e-11 Identities = 52/56 (93%), Gaps = 1/56 (2%) Strand=Plus/Minus Query 51146 CAGGACTCGAACCTGCAACCGGCGGTTTTGGAGACCGCTGCTCTACCAAATTGAGC 51201 ||||||| |||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct 461 CAGGACTTGAACCTGCAACCTGCGGTTTTGGAGACCGCTGCTCTGCC-AATTGAGC 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170565764621310