Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32872 632 7e-177
SEQ43235 91.5 5e-14
>SEQ32872
Length=2637
Score = 632 bits (700), Expect = 7e-177
Identities = 1213/1762 (69%), Gaps = 57/1762 (3%)
Strand=Plus/Minus
Query 38760 AGACCCTTGCG--GGTTGCCCCGGTCGAGTCGAAGGCACCGGCCTTGATCAGGGACTCGA 38817
|| |||||||| ||| ||| || ||||||||||| |||||||||||||| || |||
Sbjct 1828 AGGCCCTTGCGCGGGTGGCCGAGG--GAGTCGAAGGCGCCGGCCTTGATCAGTGAGTCGG 1771
Query 38818 TGGCTCGCTTGCTCACCGTCGCCTGAGTCGCTGCCTTC-AGGAAGTCCGGCAGGGAGGTG 38876
|| | |||||| | | | || | |||| | || ||| |||| | | | |||
Sbjct 1770 TGACGCGCTTGTTG-CAGGCGGTGGCGTCGATCTTGTCGAGGTAGTCGGAGAAGTCCGTG 1712
Query 38877 AACTTCCCCCAGGCTTCCCGGAGTTCAGCGATCTCCG---CGACCATGCCCTCGCCCACG 38933
||||||||| | || || | ||||| || |||| | | ||||||| |||
Sbjct 1711 AACTTCCCCTTCTCCTCGCGCG---CCGCGATGATCGAGTCGACGACGTCCTCGCCGACG 1655
Query 38934 TTCTTCACGGCGGTCAGTCCGAAGCGGATCTCGTGCTCCCCGTTGGGGGTGAACGAGCTG 38993
|| || ||| || ||||||||||| || ||| ||| || ||| | | |
Sbjct 1654 TTGCGGACCGCGCCGAGGCCGAAGCGGATGTC---CTCGCCGACGGACTGGAAGGTGTAG 1598
Query 38994 TTCGAGACCGACACGTC-GGGCGGCAGGACCCGAAGGCCCATGCGCCGTGCCTCGCCGAG 39052
|| | ||||| |||| | || || || | || | | | || ||| ||||
Sbjct 1597 GCGGACTCGTTGACGTCCGGGCTG-AGCACGCGCACCCCGAGGTGGCGGCAGTCGGCGAG 1539
Query 39053 GTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCGCAGCCGCCATGTACTC 39112
||| | || ||||| ||| | ||| |||||||||||||| ||||||||||||||
Sbjct 1538 GTAGATCGCGGACTTGTCCTTCTTGTCCGCCACCGAGGTGAGCAGCGCCGCCATGTACTC 1479
Query 39113 GGCCGGGTAGTGCGTCTTCAACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGA 39172
||| | ||| ||| ||| | | || || | | | | || ||||| | || |
Sbjct 1478 GGCGGTGTAATGCTCCTTGAGGTAGGCGGTCCAGAAGCTCACCAGACCGTAGCCGGCGGC 1419
Query 39173 GTGCGCCTTGTTGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCCCACACTGCCTGGAT 39232
||||| |||||||| |||||||| ||||| || | || | |||||||| |||||||
Sbjct 1418 GTGCGACTTGTTGAGCGCGTAGCCGGCGAACGGCAGCACCGTGTCCCACAGGGCCTGGAC 1359
Query 39233 GGCACCGTCCGAGTAGCCTCGCTCGCGCGC-TCCCTTCTG-GAAGTTCACGAACTCCTTG 39290
||| |||| |||||||| | | | | | || | | ||| || |||||||||||
Sbjct 1358 GGCCTCGTCGGAGTAGCC--GTTGGACTTCATGCCGGCGGCGAACTTGTCGAACTCCTTG 1301
Query 39291 GCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACCCAGG 39350
||||| ||||||||||||||||||||||| ||| ||| | | |||||||| ||| |
Sbjct 1300 GCCAGCACCTCGGGCTTCTTCTTGCCCATGGCCTTGCGGAACCCGTCGGCCTCACCGGCG 1241
Query 39351 GTGTA---CCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGTAGATGATCAAC 39407
||||| | || || | ||| | | | || | |||||||||||| | ||| |
Sbjct 1240 GTGTAGTTCGCGACCTT---CTGCGAGATCCTCATGATCTGCTCCTGGTACACGATGAGA 1184
Query 39408 TGGAATGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTG 39467
| | ||| |||||||| ||| | ||||||||| | ||| |||||||||||| |
Sbjct 1183 CCGTAGGTCTCCTCCAGGATGTCCTTGATGGACTCGGCGAGCTCCGGGTGGATCGGCTCG 1124
Query 39468 ATCGCCTGCTGCCCGTTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGA 39527
|||| || | |||||||| ||| ||||||| | ||| | ||| || ||||||||
Sbjct 1123 ATCGGCTTGCGGCCGTTCTTGCGGTCCGCGTAGTCCCAGTGCGCCCCGACACCCATCGGG 1064
Query 39528 CCCGGACGGTACAGCGCGACG-ACGGCTGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAG 39586
||||| ||||||||||| | | ||| | | ||||| | |||| | ||||||| |
Sbjct 1063 CCCGGCCGGTACAGCGCCAGGGACGCCACA-ATGTCGTTGAAGCCGGTGGGCTTCATGCG 1005
Query 39587 GCGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCT 39646
||||||| |||| ||||| ||| |||||||||| ||||||||| || |
Sbjct 1004 CTTGAGCAGTTCCTGCATGCCGCCGGAGTCCAGCTGGAAGATGCCGAGCGTGTCACCGCG 945
Query 39647 GGCCAGCAGCTCGTAGGTCGGGGCGTCGTCCAGAGGGATGTTCTCCAGGTCGACGTGCTC 39706
||||||||| || |||| || | |||||| | | |||||||||||||| || |||
Sbjct 944 GGCCAGCAGTTCATAGGACGCCGGGTCGTCGGTCGACAGGTTCTCCAGGTCGAAGTCCTC 885
Query 39707 CCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCC 39766
|| ||||| ||||||||| | |||| | |||| |||||||| || |||||
Sbjct 884 GCCCCGGTTCTTCTTGATGTTCTCCAGGCAGTCGGCGATGACGGTGAGGTTGCGCAGCCC 825
Query 39767 GAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGT-CGAACTGCGTGA 39825
||||||||||||||||||||||| | ||||| ||| ||||||| | | | | ||||
Sbjct 824 CAGGAAGTCCATCTTCAGCAGGCCGATGGCCTCACAGGCCGGGTAGGGCCAGCCG-GTGA 766
Query 39826 TCGTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGACCAGAGGCTCGTCGG 39885
|| |||||||| | || || ||||| |||||||||||||| ||| ||| | ||
Sbjct 765 TCAGGGCGCCGTCGTTGGGGCGCTTCCACATCGGGATGTGGTCGAGCAGCGGCACCGAGG 706
Query 39886 ACATGATCACACCGGCTGCGTGCACACCCATCTGCCGGACGAGACCTTCGAGACCGAGCG 39945
||||||||| || ||||| | || ||| ||||| | || || || ||||| |
Sbjct 705 CCATGATCACTGCGCAGGCGTGGCCGCCGGCCTGGCGGACCACGCCCTCCAGGCCGAGGG 646
Query 39946 CGGTGTCGATGACCTCCTTGGCGTCCGGGTCGGAGCCGTAGATGCCCCGGATCTCGGCGG 40005
|| |||| || ||||||| | |||| |||| || || | |||||||| ||||
Sbjct 645 CGTCGTCGTAGATCTCCTTGACCACCGGATCGGTCTCGATGAGGGTGCGGATCTCCGCGG 586
Query 40006 CCTCCTCGTACCGAGGGTGCTCGGCGTTGAAGATGCCTTCGAGGGGCATCGAGTTGCCCA 40065
|| | |||| || |||||||| | | | |||||| || || || | || ||
Sbjct 585 CCGCGCCGTAGCGCGGGTGCTCCGGATCCATGATGCC------GGACAGCGGGATGTCCT 532
Query 40066 T---CACGTCGGCCGGGTAC---GCCTTGGTCAGCTTCTCGCCGACCTGGAA---GGGCT 40116
| | | | |||||| | |||||||| | | ||| ||| |||||| |||||
Sbjct 531 TCGCCGCCTGCGCCGGGGGCAGGGCCTTGGTGATCCGGTCGGCGATCTGGAAGCCGGGCT 472
Query 40117 ---TGTCGAGCACGCGAGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGT-CCGTAC 40172
|| | | |||| || |||||||| ||||| | | ||| | |||| ||| |
Sbjct 471 GGCCGTGGTGGGCGCGGGCGGCGTCCTTGATCGCCTGCTTGGTCTTCA-CCGTGCCGAAG 413
Query 40173 GTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATGACCTCG 40232
|| || ||| ||||||||||| | || | ||| ||| | |||| |||| | ||||
Sbjct 412 GTGATGACCTGGGCGACCTTGTCCTCGCCCCAGTTCTGGGCGGCGTAGCGGATCATCTCG 353
Query 40233 CCACGACGCCGGTCAT---CGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGG 40289
||||||||||| ||||||||||||||| |||||| ||| ||| || |||
Sbjct 352 ---GAACGCCGGTCATCGGCGAAGTCGATGTCGATATCGGGGGCGGAGGGGCGTTCCGGG 296
Query 40290 TTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGG 40349
|| ||||| |||||||| || ||||||||||| | ||||||| || ||||||| ||
Sbjct 295 TTGAGGAATCGCTCGAACATCAGCCCGTGCTCGATGGGGTCGATGTTGGTGATCGTCAGT 236
Query 40350 ACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTC 40409
||||||||||||| | ||||| || ||||| || || |||||||| ||| ||| |
Sbjct 235 GCGTAGGCGACCAGGGCGCCGGCGGCGGAGCCACGGCCCGGGCCGACGGAGATGCCGATG 176
Query 40410 TCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGG 40469
|| ||||| ||| ||||||||||||||||| |||||| | ||| || |
Sbjct 175 GAGCGGGCGTGCTTGATGAGGTCGGCGACGACGAGGAAGTAGGACGGGTAGCCCTTCATG 116
Query 40470 ATGATCATGTCGATCTCGTACT 40491
||| | |||||||||||
Sbjct 115 TCGATGACACTGATCTCGTACT 94
>SEQ43235
Length=559
Score = 91.5 bits (100), Expect = 5e-14
Identities = 170/250 (68%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 40844 GTGGGAATCGTTCGTGACCACCGGAGTGAGCGCGAGGTGCTTCCCGAGCCGGTACAGGTC 40903
|||| | ||||| ||||||| ||| | ||| |||||| | |||| | | |||||
Sbjct 1 GTGGCAGTCGTTGGTGACCAGCGGCGGGAGGGCGAGGCGGCGTCCGATCTCGAGGAGGTC 60
Query 40904 GTCACGGACCCGGCGCTCGATCTCGATGTCGTGGTCCATGAGTTCGAGCAGGTACCGGTC 40963
||| |||||||| |||||| | | ||||||||||||| ||||| | ||| |||
Sbjct 61 GTCCCGGACCCGCTTCTCGATGGACAGGCCGTGGTCCATGAGCTCGAGGAAGTAGTTGTC 120
Query 40964 ACGCCCGAAGACCTCCAGGTACCGACCAGCCTCCTTCACGGCCTCGTCGTACTGCCCGAG 41023
|| ||| ||| ||| | | | || ||| | ||||||| | |||| |||||
Sbjct 121 GCGGCCGTAGATGTCCTGCCATTTCGCCGCGGCCTCGAGCGCCTCGTTGAACTGGCCGAG 180
Query 41024 GTTGAGCCGGGTCATGATCGCACCGCCAGGGCAGCCAGTCGTGACGACCAGGCCCTCGTT 41083
||||||||| | | | ||| |||||||| || ||| ||| ||| |||
Sbjct 181 CCGCAGCCGGGTCTGCACCTCGCCGGAGGGGCAGCCGGTGGTGGCGATGCTGCCGTCGGC 240
Query 41084 GTGCTCGGCG 41093
||||||||||
Sbjct 241 GTGCTCGGCG 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163235380182390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |