Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021347.1
Length=142563
Score E
Sequences producing significant alignments: (Bits) Value
SEQ22368 102 7e-17
SEQ37766 87.8 2e-12
>SEQ22368
Length=3621
Score = 102 bits (112), Expect = 7e-17
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 21384 GGCATCACGCAGCACGCCCTCGCGAAGGCCATTGGCGTCCCGCCGCGCCGAATCAACGAG 21443
|| ||||| ||| || |||| || ||||| ||||||||||| ||||| |||||||||
Sbjct 502 GGGATCACCCAGAACTCCCTGGCTGTCGCCATCGGCGTCCCGCCACGCCGCATCAACGAG 561
Query 21444 ATCGTGAAGCGCAAGCGTCGCATCACGCCGGACACCGCGCTGCGACTGGGCCGGTACTTC 21503
||||| | ||| || | || | |||| |||||||| ||| |||| || ||||||
Sbjct 562 ATCGTCCACGGCACACGCGGGGTCTCCACGGATACCGCGCTCCGATTGGGGCGCTACTTC 621
Query 21504 GGCGTGAGCGCTGCGTTCTGGCTGAACATGCAGTCCCACCACGACATCGAG 21554
||| | || |||||||||||| | ||| || |||||||||||
Sbjct 622 GGCACCACGGCGCAGTTCTGGCTGAATCTCCAGCAGGACTACGACATCGAG 672
>SEQ37766
Length=2931
Score = 87.8 bits (96), Expect = 2e-12
Identities = 358/545 (66%), Gaps = 46/545 (8%)
Strand=Plus/Minus
Query 25664 CTCGTCGAGTTCGCCGGTCGCGCGTGCTACCAGTCGTTCCACCGGCCGAACCCGAAGACG 25723
||||||||||||||||| ||||| |||||| || ||| | |||||||||||| | ||
Sbjct 2192 CTCGTCGAGTTCGCCGGCCGCGCCTGCTACGAGACGTGGGATCGGCCGAACCCGCACACC 2133
Query 25724 GCAACGAACCGCACGTACCTGGCCAACACG-CAGCGCCAGCGC-CAC--GGGTC-GATCG 25778
|| |||| || ||| || || ||| || | || ||| | | | | |||
Sbjct 2132 GCGACGA--CGGACGCCTATGTCCGCCACATCATGGATGTCGGGCACCTGAGCCTGCTCG 2075
Query 25779 AGGAGCACGCGTCGGTGAGCTTCTGGTTCACCGGTCTGTCGCGCACCTGCTCGCACGAGG 25838
|| ||||| |||| || | | | ||| |||| ||| |||| |||| |||
Sbjct 2074 AG---CACGCCTCGGCGACGATGTACCTGCGTGGTGTGTCCCGCTCCTGTGCGCAGGAGA 2018
Query 25839 TCGTCCGGCACCGGCACTTCTCGTACAGCCAGCTGTCCCAGCGGTACGTCGACAGCAACG 25898
|| | ||||||||||||||||||| ||| ||||| || ||||| ||||| | | || ||
Sbjct 2017 TCATGCGGCACCGGCACTTCTCGTTCAGTCAGCTCTCGCAGCGTTACGT-GCCGGC--CG 1961
Query 25899 G--GGCCGCGAT--CGTGCTGCCC---CCGGCCGTCGTCCAGCTGGGCCTGGCCCACCTG 25951
| || || ||| |||| ||||| ||| || || | || ||||| | |||
Sbjct 1960 GCCGGTCG-GATGTCGTGGTGCCCGAACCGATCGCCGGTGACGCGGACCTGGAGGAACTG 1902
Query 25952 TTCGACGAGGTCGACGA-----CGCGGTGAGCG-ACGC----CTACTCGGTCATCCAGAA 26001
||| || | || ||||| ||| ||| || || || | || | |
Sbjct 1901 TTCCTGCGGGCCAGTGATGTCTCGCGGCAGGCGTACGAGGAACTGCT-GGACGCCCTGGA 1843
Query 26002 GGCGC-----TCA------TCGA-CGCGGGCCTGAAGAAGAAGCAGGCCAACCAGGCGGC 26049
|| || || |||| | ||| ||| ||||||||||| ||||||||
Sbjct 1842 GGAGCGGTTCTCCGGCGAGTCGAACACGGTGCTGCGCGAGAAGCAGGCCCGGCAGGCGGC 1783
Query 26050 CCGCGCCGTCCTCATGGGCGCGACCGAGACCCGCATGGTGATGACCGGCAACTACCGGGC 26109
|| || ||||| | ||||||||||||||| | || |||||||| ||| |||
Sbjct 1782 GCGGGCGGTCCTGCCGAACGCGACCGAGACCCGGTTCGTCATGACCGGGAACCTGCGGAG 1723
Query 26110 GTGGAAGGGCTTCCTCACGCAGCGCGACTCGGAGGCCGCCGACCCGGAGATCCG-CGCGT 26168
||| | |||| || || ||| | | | || |||||||||||||||||| ||||
Sbjct 1722 CTGGCGGCACTTCATCGCGATGCGGGCCGCCGAACACGCCGACCCGGAGATCCGCCGCG- 1664
Query 26169 TGGCG 26173
|||||
Sbjct 1663 TGGCG 1659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 455810759083400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |