Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
SEQ45334 174 2e-38
SEQ36764 111 2e-19
>SEQ45334
Length=507
Score = 174 bits (192), Expect = 2e-38
Identities = 260/364 (71%), Gaps = 4/364 (1%)
Strand=Plus/Plus
Query 87669 GCAGATGAAGATTTAGGCTTCCTGCCCGGCGACGTTGCCGAAAAATTCGCCCCGTACTTC 87728
|| |||||||| | || ||| |||| || || | |||| || |||||||| || |||
Sbjct 99 GCGGATGAAGACCTCGGTTTCTTGCCGGGGGATATCTCCGAGAAGTTCGCCCCTTATTTC 158
Query 87729 CGCCCTGTTTATGACGTTCTTCAAAAACGTCTCGGTAGCCGCTACCTGCAATACTGCCTT 87788
||||| || |||||| |||| | ||| | || || |||| ||||||||
Sbjct 159 CGCCCGGTGTATGACATTCTGGTACGTCGTTTAGGATCTTCCTTTATGCAGTACTGCCTG 218
Query 87789 AAGCCCGGTA-TCGACAAAGTGGAGATTGCTCCTTTTGCGTACATGCGTGGCCGCAGTTT 87847
|||||| | ||| ||| || |||||||| || || || || ||||| || |||| ||
Sbjct 219 C-GCCCGGAAATCGGCAAGGTAGAGATTGCGCCGTTCGCTTATATGCGCGGACGCACCTT 277
Query 87848 CGAAAATGCGGTTGTCATTTTAGATGAAGCTCAGAACACTACTGCTCAG-CAGATGAAGC 87906
|||||||||||| || || | |||||||| |||||| || || ||| ||||||||
Sbjct 278 CGAAAATGCGGTCGTTATCCTGGATGAAGCCCAGAACGTGACCGC-CAGCCAGATGAAAA 336
Query 87907 TCTTCCTGACACGTATCGGGGAGAACTGTATCGTTATCGTAAACGGTGACGTCACACAGT 87966
| |||||||| || | ||||| ||| | |||||||| ||||| ||||| || ||||
Sbjct 337 TGTTCCTGACCCGCCTGGGGGAAAACGTGACGGTTATCGTTAACGGCGACGTGACCCAGT 396
Query 87967 GCGACTTGCCCAAAGGGGTGAAGTCTGGACTGGCCGACGCGTTGACCCGTTTCGAGGAAG 88026
||||| |||| || ||||| || || || ||| || || || ||||| || |
Sbjct 397 GCGACCTGCCGCGCGGCGTGAAATCCGGGCTCAGCGATGCCCTGGAGCGCTTCGAAGAGG 456
Query 88027 ACGA 88030
||||
Sbjct 457 ACGA 460
>SEQ36764
Length=622
Score = 111 bits (122), Expect = 2e-19
Identities = 108/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 99589 TGTCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCG 99648
|||| || |||||||| ||||| || || ||| ||||| | || |||||||| |||||||
Sbjct 419 TGTCCTGCCAGCTCTACCAGCGCAGCGCGGACATGTTCCTCGGCGTGCCGTTCAACATCG 360
Query 99649 CGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGCGATT 99708
| || || || || | || |||||||| || ||||||||| ||| ||| ||||| |
Sbjct 359 CCTCCTACGCGCTGCGGACCCACATGTTCGCCCAGCAGGCGGGCCTGGAGGTCGGCGAGT 300
Query 99709 TCGTCTGGACCGGCGGTGA 99727
||| ||||||||||| ||
Sbjct 299 GCGTGTGGACCGGCGGCGA 281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716223793254200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |