Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_021535.1
Length=50679
Score E
Sequences producing significant alignments: (Bits) Value
seq963 131 5e-26
SEQ25496 84.2 7e-12
>seq963
Length=26998
Score = 131 bits (144), Expect = 5e-26
Identities = 159/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 18197 TCCTAGTCGACTCCGGTAAGGCGCTGGTGCAGGGCTTCATCAACGGCATCAAGTCGATGG 18256
|||| |||||||| || ||||| ||| | |||||||||||||||||||||||| |||||
Sbjct 16420 TCCTCGTCGACTCGGGCAAGGCACTGATTCAGGGCTTCATCAACGGCATCAAGGCGATGT 16479
Query 18257 TGGGAGCTGTGGCCGACGCCGCTTCGGCGG--TCGTCTCGGCGGCACGCGACTTCTTCCC 18314
| || ||| | |||| | ||||||| | ||||| || || | ||||||||
Sbjct 16480 TCGGCAAGGTGACGGACGTGG--TCGGCGGGCTGGTCTCCAAGGTGCGTGGTTTCTTCCC 16537
Query 18315 GTTCTCCCCGGCGAAGAAGGGTCCGTTCTCGGGCTCTGGCTGGGTGGACGAGTCGGGTCG 18374
|||||||||||||||| | || | ||||| ||| ||||||||| | || || ||
Sbjct 16538 GTTCTCCCCGGCGAAGTACGGCGCATTCTCCGGCCACGGCTGGGTGCTGTACTCCGGCCG 16597
Query 18375 CTCCGTTGGTGAAGCGTTCGCCGATGGCCTCGCGG 18409
|| | ||||| |||||||| | ||| ||| ||
Sbjct 16598 GTCGATCGGTGAGGCGTTCGCGCAGGGCATCGAGG 16632
>SEQ25496
Length=2929
Score = 84.2 bits (92), Expect = 7e-12
Identities = 72/87 (83%), Gaps = 4/87 (5%)
Strand=Plus/Plus
Query 4025 CGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTCGAGTCCTG 4084
||| |||||||||| ||||||||||||||||||| |||| || ||||||||| |||||||
Sbjct 403 CGTGGCTCAATTGG-CAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 461
Query 4085 CCGTGTCTG---CACCCACCCAGTTCC 4108
|| ||| ||||| ||| |||||
Sbjct 462 TCGCCCCTGCAACACCCTCCCTGTTCC 488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 161962477474410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |