Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value SEQ39896 105 2e-18 >SEQ39896 Length=444 Score = 105 bits (116), Expect = 2e-18 Identities = 144/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 39261 CGTAACCCACCACCGGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGC 39320 ||||||| || ||||| |||||| | |||||||| | ||||||||||||||| |||| Sbjct 202 CGTAACCATCCGTCGGCACCCATTCTGTTTTCAGACTGCGGAAGAAGCGTTCCATCGGGC 143 Query 39321 TGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATA 39380 ||||||||||||||||||| ||||| || | || || | || ||| | || ||| Sbjct 142 TGTTATCCCAGCAGTTTCCCCGCCGACTGACGCTTTGGTTTATTCTGTAAC-TCAAGATA 84 Query 39381 ACTGCCCGGAACTGCCTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCG 39440 | | | | | || ||||| || || ||||| ||||| |||||||| || | Sbjct 83 AGTTGTTGATATTTTAGGCCTGTATACTGGCTTCCCTGGTCGCTATGGAACATGACATCA 24 Query 39441 CCGGGCTTACCACGGGTTTC 39460 | || | |||||| ||||| Sbjct 23 CGCGGTTGACCACGCGTTTC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132525802790370