Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq61 251 6e-62 SEQ10860 145 7e-30 seq4710 114 1e-20 seq4983 105 6e-18 >seq61 Length=55249 Score = 251 bits (278), Expect = 6e-62 Identities = 955/1487 (64%), Gaps = 45/1487 (3%) Strand=Plus/Minus Query 138172 ATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGTTTTTAACCCATTTTCC 138231 || |||| || ||||| || || | ||||||||||||||| || || | || | | Sbjct 27990 ATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCTGTCTTGAGGCCTGCCTTC 27931 Query 138232 CAGGCGTACATGTGTATCGAAGTGAGTAAC--GCGTAAGTCGGTTTCGCCAGAAAT--AT 138287 || | | | | || || || || |||| || ||| || |||| || | | || Sbjct 27930 CACGAGAAGAAATGAATGGATGT---TAACTTGCCGTAGTTGGGTTCGGCA-ACGTGAAT 27875 Query 138288 GTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAATT 138347 ||| || ||||||||||| || || ||||| || |||||| ||||| || || Sbjct 27874 GTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCCATCTTGATGG---- 27819 Query 138348 TTTACTTTTC----ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTG 138403 || |||| | || ||||| ||||| ||||| ||||| || | | | || || | Sbjct 27818 TTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCCTGAGGAATGG 27759 Query 138404 TTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGT 138463 | | || ||||| ||| || |||||||| |||| |||||||||| | Sbjct 27758 ATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATGTCATCATCCC 27699 Query 138464 ACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGG 138523 | | || | | | | || || | || || |||| || | || || |||| Sbjct 27698 ATAAATCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTGAACTCTCCGG 27639 Query 138524 CCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCA 138583 ||| || || | ||||||||| || | |||||||| || || || || |||| Sbjct 27638 ACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCCA 27579 Query 138584 GAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGT 138643 ||||| || || | || || ||||| || || | || || || | | || | Sbjct 27578 TGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCTACAAGCAGCGAGTTTCTAACGCCAT 27519 Query 138644 GAAGCTTGATTCGTTCC--TTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTT 138701 | |||||| ||| || || | | ||| ||||| | | ||| | |||| Sbjct 27518 GCTCTTTGATT--TTCAATTTTAGAGCAGTCCAATCCCAAAGGCTTGTGGGTGTCTTGTC 27461 Query 138702 CCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATAC 138761 ||||||||||||||| | |||||| || | |||| || |||| | || || Sbjct 27460 CCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGG 27401 Query 138762 ACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGC 138821 ||| || ||| |||| ||| || ||||| || ||||||||||| || |||||| Sbjct 27400 ACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAA 27341 Query 138822 AATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAA 138881 |||||||||||||||||| ||| | | | ||||| || || | || | || | || Sbjct 27340 GATCTGCTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTAA 27281 Query 138882 CGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTT 138941 |||||||| | || || ||||| | || | || ||||| | | ||| || || Sbjct 27280 GGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTT 27221 Query 138942 TGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCAC 139001 ||| | | ||||| || || | ||| ||||||||||| ||||||| ||| Sbjct 27220 TGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGT 27161 Query 139002 CTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTC 139061 ||||| | ||| | | | |||||| |||| || || || ||| Sbjct 27160 TTTAGTAACTTCCTTCAGTTTCTTGAAATCGAATGTT------TTCTCT-----GAAGTC 27112 Query 139062 GACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCT 139121 ||||| | || | ||||| || | ||||| || || | || ||||| | Sbjct 27111 -ACAAACATATTCAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCGA 27053 Query 139122 GTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATT 139181 ||||| |||||||| | || | || || || ||||| || || | ||| || ||||| Sbjct 27052 ATATTCAACAATTTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATT 26993 Query 139182 GCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGT 139241 ||| || | ||| |||| || ||| | ||||| ||||| |||||||| || ||||| | Sbjct 26992 GCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGA 26933 Query 139242 CTCTATAATGA-ATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTTCG---- 139296 || | |||| || || ||| | |||| || | |||| | || Sbjct 26932 TTCAACAATGGCATACCAAAGAGTTTGT-GCTTTAAT----CACACGATTTGCGCGACCC 26878 Query 139297 TCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCG 139356 |||| |||||||||| || || | || || || || | |||| | || Sbjct 26877 TCGCTCTCGTACTTTGTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCG 26818 Query 139357 CGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAAC 139416 ||||||||| |||||||| |||||||| | | || |||| || ||| |||| ||| Sbjct 26817 GGACACTTGTGAGGACACAACAGCGACCAATCCTCATTGGCCTCCACACGCTTCATAAAC 26758 Query 139417 AGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATG 139476 ||||| || |||||||| ||| | | | ||| || || | | |||||| ||| || Sbjct 26757 AGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTG 26698 Query 139477 TTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCC 139536 || ||| | || | ||| ||||| | || | ||||| |||||||| || ||||| Sbjct 26697 TTCTTTTTGAGGTCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCA 26638 Query 139537 ATTGCGCCTTTCCGTTTGCC---ACCTTGATCGACGTGTCGTACAGCATTATTGAATACG 139593 | |||||| || ||||| |||||||||||| | || | ||||||| || || Sbjct 26637 AAAGCGCCTGGTCGCTTGCCGCCACCTTGATCGACATAACGAGCCACATTATTAAACACT 26578 Query 139594 CGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGAT 139640 | | ||| ||| ||| ||| | | || || || |||| || ||| Sbjct 26577 CTGAGCATGGGCACCAAACCATTTGAAGTGCCATTAGTGCCACAGAT 26531 >SEQ10860 Length=7223 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||| ||||| ||||||| || || ||||| || || || || || || ||| | Sbjct 1683 ACGATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCG 1624 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || || | |||| || ||| ||||| || |||||||||||||| ||||| ||| Sbjct 1623 TCGGATACCATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGAT 1564 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| ||||||||||||||||| || || |||| ||| | | | | || ||||| Sbjct 1563 CAACAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTAC 1504 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||| | ||||||||| | || | ||||| || Sbjct 1503 AATATCCAAAAAGAGTCTACATTGCACTTGGTGCTCCGCCTTCGCGGTGG 1454 >seq4710 Length=78879 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || || || || || || || |||| | Sbjct 8830 ATGCAAATCTTCGTGAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTGGA-GCCATC 8772 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||||||||| |||||||| || || ||||| Sbjct 8771 TGATACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAAGGAATCCCCCCAGATCA 8712 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || |||||||||||| | | ||||||| || || Sbjct 8711 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCAGACTACAA 8652 Query 24883 CATTCAAAAGGAATCGACAC-TACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| | | ||||||||| |||| |||| || || Sbjct 8651 CATCCAGAAGGAGTCGACCCTTGCACTTGGTGCTGCGTCTGCGTGGTGG 8603 >seq4983 Length=3163 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || ||||| | || || || || | Sbjct 870 ATGCAGATCTTTGTAAAGACATTGACTGGCAAGACCATTACCTTGGAGGTTGAGCCCTCT 811 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || ||||| Sbjct 810 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 751 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| ||||| || ||| |||| ||| | | | | || || || ||| Sbjct 750 CAGCGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGTACCCTCTCCGACTACAAC 691 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || |||| || ||| Sbjct 690 ATCCAGAAGGAGTCAACCCTTCACTTGGTGCTCCGTCTGCGTGGTGGC 643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449638318389400