Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value SEQ15269 141 8e-29 >SEQ15269 Length=11664 Score = 141 bits (156), Expect = 8e-29 Identities = 158/209 (76%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 ||||| |||||| || || |||| ||||| || |||||||| ||||| || ||||||| Sbjct 3780 ATCGAACTGCGTCTGAGCACCCAATTCGCAACCAAAGTACTTGGTCGGATAGGTGGCCGG 3721 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 || || | || || | |||| ||||||||| | ||| ||||||||||| ||||| Sbjct 3720 GCGGCCGATAGCACGCGCCACCTCGGCCATGTTGACCAGGACGGTCTTGATGCCATTGCC 3661 Query 34557 CTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614 ||| || || |||||||| ||||| |||||||| |||||||| ||||| ||||| Sbjct 3660 CTTGCCCTCAACCTTGGCCTGCAGA--CGCGGCATCTTGTAGCGATAGAAGATGTCCGTA 3603 Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCAT 34643 || |||| || || || || ||| |||| Sbjct 3602 ACGCTGCGATTCACATTGACGGTCGCCAT 3574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412609622369765