Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value SEQ36884 223 2e-53 >SEQ36884 Length=2041 Score = 223 bits (246), Expect = 2e-53 Identities = 265/357 (74%), Gaps = 3/357 (1%) Strand=Plus/Plus Query 94993 ACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCGC 95052 ||| |||||| | ||| |||||| ||||| |||||||| | || | | | Sbjct 358 ACCACCGCCTGGACCTCCTCGTCGGTGACGAAGGCGCCCTGGAGGCGCTTCGGCTTGTTC 417 Query 95053 GCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCG 95112 |||||| || | ||| | ||||| ||||| || ||||||| |||||| ||||||| | Sbjct 418 GCCCCCTGCGGGATGAACAGGCCGTCGCCCATACCGATGAGCTTCTCGGCGCCGCCCTGG 477 Query 95113 TCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACG 95172 || ||||| || ||| || || || || | || ||||||| |||| ||||||||| Sbjct 478 TCGAGGATGACGCGGGAGTCCGTCAGCGAGGACGTCGCGAACGCCAGCCGGGACGGCACG 537 Query 95173 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 95232 |||| ||||| || || ||||| || |||||||| || |||||||||||||| || || Sbjct 538 TTGGTCTTGATCAGACCGGTGACGACGTCCACGGACGGACGCTGCGTCGCCAGCACCAGG 597 Query 95233 TGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 95292 || ||||| || ||||| |||||||||| ||| ||||| ||| | |||||| || | | Sbjct 598 TGGATACCCGCGGCGCGGGCCTTCTGGGTGATCCGGACGATGGCGTCCTCGA--TC-TCC 654 Query 95293 TTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 95349 || | || |||||||||||| ||||| |||||||| || ||||||||| ||| Sbjct 655 TTCGGGGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGACGCACACGATGTACGGG 711 Score = 156 bits (172), Expect = 3e-33 Identities = 200/276 (72%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 95367 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCCACGGTGAGCCA 95426 ||||||||||| ||| || ||| | | |||||| | ||||||||| || ||||| Sbjct 789 GTGGCGCACGCGGGCGGACTTCATGTCCATGTACCGCTGCTCCATCTCCTCGACCAGCCA 848 Query 95427 CCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGAT 95486 ||||| | | |||||| | |||| |||| | |||| | ||||| ||||| Sbjct 849 GGTCAGCGCCGTCGCCGCCTTCTTCGGCTGCGTGATGATCGGCGTGATGAGGTGCGGGAT 908 Query 95487 ACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCGATC 95546 || | ||| ||||| || ||||||||||||||||||| | |||||| |||| || Sbjct 909 CCCCTCGTAGGGGGTCAGCTCCACCATCTTCGGGTCGACGAGGATGAGGCGGACCTCCTC 968 Query 95547 AGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGA 95606 || | || ||| ||| ||||| || |||| |||||||| |||| ||||| || || Sbjct 969 CGGGGTCGCCCGGGTGAGGATGGACACGAGCAACGAGTTGACGAAGGCCGACTTACCGGA 1028 Query 95607 TCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTT 95642 ||||||| ||| || ||||||||||| ||||| || Sbjct 1029 GCCGGTGGAGCCGGCGACCAGCAGGTGCGGCATCTT 1064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346230941831490