Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_022067.1
Length=109960
Score E
Sequences producing significant alignments: (Bits) Value
SEQ36884 214 1e-50
>SEQ36884
Length=2041
Score = 214 bits (236), Expect = 1e-50
Identities = 263/357 (74%), Gaps = 3/357 (1%)
Strand=Plus/Plus
Query 95498 ACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCGC 95557
||| |||||| | ||| |||||| ||||| |||||||| | || | | |
Sbjct 358 ACCACCGCCTGGACCTCCTCGTCGGTGACGAAGGCGCCCTGGAGGCGCTTCGGCTTGTTC 417
Query 95558 GCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTCG 95617
|||||| || | ||| | ||||| ||||| || ||||||| |||||| || |||| |
Sbjct 418 GCCCCCTGCGGGATGAACAGGCCGTCGCCCATACCGATGAGCTTCTCGGCGCCGCCCTGG 477
Query 95618 TCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACG 95677
|| ||||| || ||| || || || || | || ||||||| |||| |||||||||
Sbjct 478 TCGAGGATGACGCGGGAGTCCGTCAGCGAGGACGTCGCGAACGCCAGCCGGGACGGCACG 537
Query 95678 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 95737
|||| ||||| || || ||||| || |||||||| || |||||||||||||| || ||
Sbjct 538 TTGGTCTTGATCAGACCGGTGACGACGTCCACGGACGGACGCTGCGTCGCCAGCACCAGG 597
Query 95738 TGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 95797
|| || || || ||||| |||||||||| ||| ||||| ||| | |||||| || | |
Sbjct 598 TGGATACCCGCGGCGCGGGCCTTCTGGGTGATCCGGACGATGGCGTCCTCGA--TC-TCC 654
Query 95798 TTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGG 95854
|| | || |||||||||||| || ||||||||||| || ||||||||| |||
Sbjct 655 TTCGGGGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGACGCACACGATGTACGGG 711
Score = 156 bits (172), Expect = 3e-33
Identities = 200/276 (72%), Gaps = 0/276 (0%)
Strand=Plus/Plus
Query 95872 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCCACGGTGAGCCA 95931
||||||||||| ||| || ||| | | |||||| | ||||||||| || |||||
Sbjct 789 GTGGCGCACGCGGGCGGACTTCATGTCCATGTACCGCTGCTCCATCTCCTCGACCAGCCA 848
Query 95932 CCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGAT 95991
||||| | | |||||| | |||| |||| | |||| | ||||| |||||
Sbjct 849 GGTCAGCGCCGTCGCCGCCTTCTTCGGCTGCGTGATGATCGGCGTGATGAGGTGCGGGAT 908
Query 95992 ACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCGATC 96051
|| | ||| ||||| || ||||||||||||||||||| | |||||| |||| ||
Sbjct 909 CCCCTCGTAGGGGGTCAGCTCCACCATCTTCGGGTCGACGAGGATGAGGCGGACCTCCTC 968
Query 96052 AGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGA 96111
|| | || ||| ||| ||||| || |||| |||||||| |||| ||||| || ||
Sbjct 969 CGGGGTCGCCCGGGTGAGGATGGACACGAGCAACGAGTTGACGAAGGCCGACTTACCGGA 1028
Query 96112 TCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTT 96147
||||||| ||| || ||||||||||| ||||| ||
Sbjct 1029 GCCGGTGGAGCCGGCGACCAGCAGGTGCGGCATCTT 1064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351549551599505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |