Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_022085.1 Length=76483 Score E Sequences producing significant alignments: (Bits) Value SEQ13951 450 7e-122 SEQ32968 147 1e-30 SEQ22413 147 1e-30 SEQ43844 100 1e-16 >SEQ13951 Length=2429 Score = 450 bits (498), Expect = 7e-122 Identities = 593/817 (73%), Gaps = 9/817 (1%) Strand=Plus/Minus Query 66165 TATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAAT 66224 |||||| | ||| ||| || |||||||| |||| |||| ||||||| || || || || Sbjct 1968 TATCGCGATCAACGTCGCGCTCGGCATCGGCGGGTTCCCGCGGGGCCGTGTCGTCGAGAT 1909 Query 66225 CTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCA 66284 |||||| || || || || || ||| | || || || ||||| || ||| | ||||| Sbjct 1908 CTACGGTCCGGAGTCCTCGGGTAAGACCACGGTGGCGCTGCACGCTGTCGCCGAGGCGCA 1849 Query 66285 GAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGC 66344 ||||| ||| |||| |||||||| ||||||||| |||||| |||| ||||| |||||||| Sbjct 1848 GAAGGGCGGCGGCATCGCCGCCTTCATCGACGCGGAGCACGCCCTCGACCCCGAGTACGC 1789 Query 66345 CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCA 66404 ||| ||||| |||||| ||||||||| | || ||||||||||| |||||||| Sbjct 1788 GAAGAACCTCGGGGTGGACACGGACAACCTCCTCGTCTCCCAGCCGGACACCGGCGAGCA 1729 Query 66405 GGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGA 66464 ||| || ||||||| ||| | |||||| ||| |||| | | |||| |||| || || Sbjct 1728 GGCACTCGAGATCGCCGACATGCTCGTCCGGTCGGGCGCGGTCGACATCATCGTGGTGGA 1669 Query 66465 CTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGT 66524 ||| || ||||| ||| ||| || ||| |||| || || || || ||||||||||| Sbjct 1668 CTCGGTCGCGGCGCTGACCCCGAAGGCGGAGATCGAGGGGGAGATGGGCGACAGTCACGT 1609 Query 66525 CGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATC-TCCA 66583 ||| ||||| || ||||||||| ||||| |||||||| | ||||| | || ||| Sbjct 1608 CGGTCTGCAGGCCCGCCTCATGAGCCAGGCACTGCGCAAGATGACCGGTGCACTCAGCCA 1549 Query 66584 GCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCT 66643 | ||| ||| | ||| |||||||| | |||||||||||||| |||| | Sbjct 1548 G-ACCGGCACCACCGCCATCTTCATCAACCAGCTCCGCGAGAAGATCGG---CGTGATGT 1493 Query 66644 ACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCA 66703 ||| || |||||||| |||||||||||||| ||| ||||||||| || |||||| Sbjct 1492 TCGGTTCGCCGGAGACCACGACGGGCGGCAAGGCACTGAAGTTCTACGCTTCGGTCCGCT 1433 Query 66704 TGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCC 66763 || |||| || || || ||||| || | || || ||||| ||||| ||| Sbjct 1432 GCGACATCCGGCGGGTCCAGACGCTCAAGGACGGGCAGGATGCGGTCGGTAACCGGACCA 1373 Query 66764 GGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCG 66823 | ||||| |||||||||||||| | | |||||| | | |||||| ||| ||| Sbjct 1372 AGATGAAGATCGTCAAGAACAAGGTCTCGCCGCCGTTCAAGATCGCCGAATTCGATGTCC 1313 Query 66824 TGTACGGGGAGGGCATCTCGCGTGA--GGTCGAACTCCTCGACCTGGCCGTGTCGCAGGG 66881 | ||||| |||||||||| || || |||||| || ||||||||| |||| | || Sbjct 1312 TCTACGGACAGGGCATCTCCCGGGAAGGGTCGA--TCATCGACCTGGGCGTGGACAACGG 1255 Query 66882 CCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCCCAGGGCAA 66941 ||| | |||||||| ||| |||||| || ||| || | | | | | |||||||| Sbjct 1254 ACTGATCAAGAAGTCCGGCTCCTGGTACACCTACAAGGGCGACCAGCTGGGGCAGGGCAA 1195 Query 66942 GCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGAC 66978 | |||||| | ||| ||||||| ||||||||| Sbjct 1194 GGAGAAGGCCCGCGAGTTCCTCAAGGAGAACCCGGAC 1158 >SEQ32968 Length=2597 Score = 147 bits (162), Expect = 1e-30 Identities = 224/313 (72%), Gaps = 11/313 (4%) Strand=Plus/Minus Query 59818 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 59877 ||||||||| ||| || ||| || || ||| ||| | |||| ||| |||| Sbjct 2172 TCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCCAGTGGCGCGGCGGTCG 2113 Query 59878 CCAACTTCACCGTCGTGTCCAACGAACGCCGCCG---CGACGCCCAAGGC-AAC---TGG 59930 | |||||| ||||| ||| |||| | ||| || |||| | ||| | ||| ||| Sbjct 2112 CGAACTTCCGCGTCGCGTC-AACG--CCCCGTCGGTTCGACTCG-AAGTCGAACCAGTGG 2057 Query 59931 GTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTG 59990 |||||||| || || |||||| |||||| | |||||||| | |||||||||||||| Sbjct 2056 GTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCCGCCGAGAACGTC 1997 Query 59991 GCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCC 60050 ||| | ||| || || || | ||||| ||||| ||| || ||||| ||| Sbjct 1996 GCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGCTGCGCCAGCGGTCC 1937 Query 60051 TTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGC 60110 | ||| ||| ||||| || ||||||||||| ||||||||||||| |||||| ||||| Sbjct 1936 TACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTCGACGAGGTCGGC 1877 Query 60111 CCGTCGCTGCGGT 60123 ||||| || |||| Sbjct 1876 CCGTCTCTCCGGT 1864 >SEQ22413 Length=7522 Score = 147 bits (162), Expect = 1e-30 Identities = 220/311 (71%), Gaps = 11/311 (4%) Strand=Plus/Minus Query 59818 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 59877 ||||||||| ||| || ||||||||| |||| | ||||| | || || ||| Sbjct 3674 TCGTCGGCAACCTCGTGGCGGACCCCGAGTTGCGCTACACCCCCAGCGGTGCCGCGGTCA 3615 Query 59878 CCAACTTCACCGTCGTGTCCAACGAACGCCGCCGCGACGCCCAAGGCAAC---TGGGTCG 59934 |||||||| || | |||| || ||| |||| | || |||| ||||||| Sbjct 3614 CCAACTTCCGGGTGGCTTCCACACCGCGACGCTTCGACTCACAGACCAACCAGTGGGTCG 3555 Query 59935 ACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGG 59994 ||| ||| ||| ||||| ||||| |||||||||| ||||||||||||||| || Sbjct 3554 ACGACGAGGCCTTGTTCCTGACCTGCAACATCTGGCGCACCGCCGCCGAGAACGTCGCCA 3495 Query 59995 AAAGCCTCCAGAAAGGCCAGCGCGTCATCGT----GCATGGCTACCTCAAGCAGCGCTCC 60050 | ||||| || || ||| | || || ||||| | || | | |||| || ||| Sbjct 3494 ACAGCCTGCACAAGGGCGACCGGGTGATCGTCACCGGCCGGTTGCGTCAA----CGGTCC 3439 Query 60051 TTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGC 60110 | ||||||| ||||| || ||||||||||| ||||||||||| |||||| ||||| Sbjct 3438 TACGAGACCCGCGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGACCGACGAGGTCGGC 3379 Query 60111 CCGTCGCTGCG 60121 || |||||||| Sbjct 3378 CCCTCGCTGCG 3368 >SEQ43844 Length=619 Score = 100 bits (110), Expect = 1e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 59949 TTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGGAAAGCCTCCAGAAA 60008 |||||| || || | | |||||| | || || |||||||||||| | ||||| || || Sbjct 151 TTCCTCACCTTCAACCTGTGGCGCCAGGCAGCGGAGAACGTGGCGAACAGCCTGCACAAG 210 Query 60009 GGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGC 60068 || | || || ||||| ||| | ||| ||||| |||| |||| | ||| ||| Sbjct 211 GGTGACCGGGTGATCGTCGTCGGCAATCTCCGCCAGCGGTCCTACGAGTCGAAGACCGGC 270 Query 60069 GACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCCGTCGCTGCGGT 60123 |||| ||||||||| |||| | |||| |||||| ||||||| || || |||| Sbjct 271 GACACGCGCACCGTGTACGAGATCGAGGCGGACGAGGTCGGCCCTTCCCTCCGGT 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244483346425820