Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value SEQ45565 113 7e-19 SEQ41001 109 9e-18 seq61 98.7 2e-14 seq5601 96.9 5e-14 >SEQ45565 Length=619 Score = 113 bits (124), Expect = 7e-19 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 ||||||||||||||||||| || |||||||| | | |||||||| |||||||| |||| Sbjct 25 TGCCGTCGGTGCCGTTTTTGAAGCCGACCGGGCAGGAGAGCGCCGAGGCCATTTCACGGT 84 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCA 2175175 | | |||||| |||||||||||||| || | ||||||||| Sbjct 85 GGATCTGGCTTTCGGTGGTGCGCGCACCGATGGCGCCCCA 124 >SEQ41001 Length=2622 Score = 109 bits (120), Expect = 9e-18 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 2035625 CACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTT 2035684 ||| || ||||| |||||| | || |||||||| | ||||||||| | || || | Sbjct 853 CACTCTATTTGAATTGATCTTGGCTGCCAACTATTTGGACATCAAGGGATTGCTGGAGCT 794 Query 2035685 GGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGAC 2035744 ||||||||| ||||||||| | |||||||||||| | || ||||| || |||||||| Sbjct 793 AACGTGCAAGACTGTGGCCAACATGATCAAGGGCAAGACTCCGGAGGATATACGCAAGAC 734 Query 2035745 CTTTAACATCAAG 2035757 |||||||||||| Sbjct 733 ATTTAACATCAAG 721 >seq61 Length=55249 Score = 98.7 bits (108), Expect = 2e-14 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878 || || || |||||||| || | | | |||| || ||||||||| ||| || Sbjct 26805 GGACACAACAGCGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATC 26746 Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938 |||| | |||| |||||||| || || | || ||| |||||||| ||||||||| ||| Sbjct 26745 CACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGG 26686 Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTG 2071998 || | | || | || |||| ||||| || |||||||| |||||| ||||| Sbjct 26685 TCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGT 26626 Query 2071999 CGCTTGCCGCCGCC 2072012 ||||||||||| || Sbjct 26625 CGCTTGCCGCCACC 26612 >seq5601 Length=8218 Score = 96.9 bits (106), Expect = 5e-14 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 429032 GTCGGGCAAGCCCACCAAGGGCGTCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCG 429091 ||||||||| ||| ||||| || || ||| |||||||||||||||| || || || Sbjct 411 GTCGGGCAAACCCCTCAAGGCGATCAAGGCGCGTCTCAAGGGCAAGGAGGGTCGCATTCG 352 Query 429092 CGGCAATTGCATGGGCAAGCGCGTCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCC 429151 || |||| |||||||| || ||| |||| | || || | ||||||| ||||| || Sbjct 351 TGGTAATTTGATGGGCAAACGTGTCGACTTCTCCGCACGTACTGTCATCACACCCGATCC 292 Query 429152 CGAAATCGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCC 429211 | | | || || ||||||||||||| | || | | | |||||||| || Sbjct 291 CAATTTGCGTATCGATCAGGTGGGCGTGCCGCGTTCCATAGCACAAAATCTCACCTTCCC 232 Query 429212 CGAGCGCGTGACGCCCTT 429229 ||||| || |||||||| Sbjct 231 CGAGCTGGTTACGCCCTT 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7911342000865095