Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_022328.1 Length=70236 Score E Sequences producing significant alignments: (Bits) Value seq2825 123 1e-23 >seq2825 Length=19190 Score = 123 bits (136), Expect = 1e-23 Identities = 404/615 (66%), Gaps = 36/615 (6%) Strand=Plus/Minus Query 44915 CTCGTCGCCGTTCTCGTCCACCTCGCGGGTCTCGGCCCCGGTGTCGAGCGCGGTCAGGCT 44974 ||||| ||| | ||||| | ||| ||||||||||| ||| || |||| ||||||| | Sbjct 6804 CTCGTTGCCCTCGTCGTCGAACTCCTGGGTCTCGGCCTCGGCGTAGAGCTGGGTCAGGGT 6745 Query 44975 GACCAGCTTCATGGCGCGCGTGCTGCCCGCC-AGGTCGAGCACCAGCGCGTCGTCCTTGT 45033 | | || ||| || |||| | || |||| ||||||| ||||| |||||| ||||| Sbjct 6744 GGCGAGTTTCTTGTCGCG-GAGCATCCCGGTGAGGTCGATGACCAGTGCGTCGGTCTTGT 6686 Query 45034 -----------------TCGG-GTACAGGCGCAGCGCC-CGGCCGACCATCTGGCTGTAG 45074 |||| ||| || || | |||| || ||||| || || | | Sbjct 6685 CCTGTCCGGTGTCCGGGTCGGTGTAGAGACGGA-CGCCACGTCCGACAATTTGCGCGAAA 6627 Query 45075 AGATTGCGGCTG--CGGGTCGGCCGCGCCAGCACCACCGTGTCGCACATGGGGAAGTCCG 45132 || | || ||| | ||| || || |||||||| || ||| || ||||||||||| Sbjct 6626 AG--TACGTCTGACCTGGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGTCCG 6569 Query 45133 CTCCCTCGGTGAGCACCTGCACCGTGACCAGCGCGCGGGCGGTGCCGTTGCGGAAGTCCT 45192 | |||||||||||||||||||| ||||||| || ||| |||| ||||||| | Sbjct 6568 CGCCCTCGGTGAGCACCTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGGAACTGGC 6509 Query 45193 CGTAGATGGGCAGGCGCT-CGTCGTACTGCATGGC-ACCGGTCACGGCGAC--GGCCGGG 45248 |||||| | | |||| || | | ||| |||| |||| ||| |||| || ||| Sbjct 6508 GGTAGATTTCCTGCCGCTCCGCCTTGCTG--TGGCTGCCGGACAC--CGACCGGGTGGGG 6453 Query 45249 TAGTCG-GCGTCGGTGAGCGCGTCTGCGATGTGGTGGGCGGCGTCGACACTGGCCGCGAA 45307 ||| || ||| |||||||| || | || | | | | | ||||| | ||||| Sbjct 6452 TAGCCGCGCG-CGGTGAGCTCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGAA 6394 Query 45308 GATGATCGGGCGGCGGTCTCCTGCGTGCAGCTTGATCGCGTCCACGACGTACTGCGTGCA 45367 |||||||||| |||||| | ||||| | | ||||| ||| | | | | | Sbjct 6393 GATGATCGGGACGCGGTCGGCGGCGTGGCGGAGCACGGCGTCGACGGTGGTCGGGATCGA 6334 Query 45368 CGCCTCCATCACCTCGGCCAGCTCGCCCTGGTGAAAGTCACCGGCCACGCTGCGCACGTC 45427 || ||| |||||| |||| ||| ||| | |||| ||| | || | | Sbjct 6333 GGCACGCATGACCTCGTCCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCCG 6274 Query 45428 ATCGAGCGCGTCCAGGCCCTTGATGCGCACTGTGAGGCCACGGGGCTGCACCAGGAACCC 45487 |||| || |||| || | || ||| || || || |||||| | || |||||||| Sbjct 6273 GGCGAGGAGGTTCAGGTGCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACCC 6214 Query 45488 CTTCTTGATGGCCCA 45502 || | ||| ||||| Sbjct 6213 GTTGTCGATCGCCCA 6199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 224504179125285