Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_022330.1
Length=76586
Score E
Sequences producing significant alignments: (Bits) Value
SEQ13951 441 3e-119
SEQ22413 147 1e-30
SEQ32968 145 4e-30
SEQ43844 100 1e-16
>SEQ13951
Length=2429
Score = 441 bits (488), Expect = 3e-119
Identities = 591/817 (72%), Gaps = 9/817 (1%)
Strand=Plus/Minus
Query 66145 TATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAAT 66204
|||||| | ||| ||| || |||||||| |||| |||| ||||||| || || || ||
Sbjct 1968 TATCGCGATCAACGTCGCGCTCGGCATCGGCGGGTTCCCGCGGGGCCGTGTCGTCGAGAT 1909
Query 66205 CTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCA 66264
|||||| || || || || || ||| | || || || ||||| || ||| | |||||
Sbjct 1908 CTACGGTCCGGAGTCCTCGGGTAAGACCACGGTGGCGCTGCACGCTGTCGCCGAGGCGCA 1849
Query 66265 GAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGC 66324
||||| ||| |||| |||||||| ||||||||| |||||| |||| ||||||||||||||
Sbjct 1848 GAAGGGCGGCGGCATCGCCGCCTTCATCGACGCGGAGCACGCCCTCGACCCCGAGTACGC 1789
Query 66325 CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCA 66384
||| ||||| |||||| ||||||||| | || ||||||||||| ||||||||
Sbjct 1788 GAAGAACCTCGGGGTGGACACGGACAACCTCCTCGTCTCCCAGCCGGACACCGGCGAGCA 1729
Query 66385 GGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGA 66444
||| || ||||||| ||| | |||||| ||| |||| | | |||| |||| || ||
Sbjct 1728 GGCACTCGAGATCGCCGACATGCTCGTCCGGTCGGGCGCGGTCGACATCATCGTGGTGGA 1669
Query 66445 CTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGT 66504
||| || ||||| ||| ||| || ||| |||| || || || || |||||||||||
Sbjct 1668 CTCGGTCGCGGCGCTGACCCCGAAGGCGGAGATCGAGGGGGAGATGGGCGACAGTCACGT 1609
Query 66505 CGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATC-TCCA 66563
||| ||||| || ||||||||| ||||| |||||||| | || || | || |||
Sbjct 1608 CGGTCTGCAGGCCCGCCTCATGAGCCAGGCACTGCGCAAGATGACCGGTGCACTCAGCCA 1549
Query 66564 GCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCT 66623
| ||| ||| | ||| |||||||| | |||||||||||||| |||| |
Sbjct 1548 G-ACCGGCACCACCGCCATCTTCATCAACCAGCTCCGCGAGAAGATCGG---CGTGATGT 1493
Query 66624 ACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCA 66683
||| || |||||||| |||||||| ||||| ||| ||||||||| || ||||||
Sbjct 1492 TCGGTTCGCCGGAGACCACGACGGGCGGCAAGGCACTGAAGTTCTACGCTTCGGTCCGCT 1433
Query 66684 TGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCC 66743
|| |||| || || || ||||| || | || || ||||| ||||| |||
Sbjct 1432 GCGACATCCGGCGGGTCCAGACGCTCAAGGACGGGCAGGATGCGGTCGGTAACCGGACCA 1373
Query 66744 GGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCG 66803
| |||| |||||||||||||| | | |||||| | | |||||| ||| |||
Sbjct 1372 AGATGAAGATCGTCAAGAACAAGGTCTCGCCGCCGTTCAAGATCGCCGAATTCGATGTCC 1313
Query 66804 TGTACGGGGAGGGCATCTCGCGTGA--GGTCGAACTCCTCGACCTGGCCGTGTCGCAGGG 66861
| ||||| |||||||||| || || |||||| || ||||||||| |||| | ||
Sbjct 1312 TCTACGGACAGGGCATCTCCCGGGAAGGGTCGA--TCATCGACCTGGGCGTGGACAACGG 1255
Query 66862 CCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAA 66921
||| | |||||||| ||| |||||| || ||| || | | | | | ||||||||
Sbjct 1254 ACTGATCAAGAAGTCCGGCTCCTGGTACACCTACAAGGGCGACCAGCTGGGGCAGGGCAA 1195
Query 66922 GCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGAC 66958
| |||||| | ||| ||||||| |||||||||
Sbjct 1194 GGAGAAGGCCCGCGAGTTCCTCAAGGAGAACCCGGAC 1158
>SEQ22413
Length=7522
Score = 147 bits (162), Expect = 1e-30
Identities = 220/311 (71%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 60576 TCGTCGGCACGCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 60635
||||||||| || || ||||||||| |||| | ||||| | || || |||
Sbjct 3674 TCGTCGGCAACCTCGTGGCGGACCCCGAGTTGCGCTACACCCCCAGCGGTGCCGCGGTCA 3615
Query 60636 CCAACTTCACCGTCGTGTCCAACGAACGCCGCCGCGACGCCCAGGGCAAC---TGGGTCG 60692
|||||||| || | |||| || ||| |||| | ||| |||| |||||||
Sbjct 3614 CCAACTTCCGGGTGGCTTCCACACCGCGACGCTTCGACTCACAGACCAACCAGTGGGTCG 3555
Query 60693 ACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGG 60752
||| ||| ||| ||||| ||||| |||||||||| ||||||||||||||| ||
Sbjct 3554 ACGACGAGGCCTTGTTCCTGACCTGCAACATCTGGCGCACCGCCGCCGAGAACGTCGCCA 3495
Query 60753 AAAGCCTCCAGAAAGGCCAGCGCGTCATCGT----GCATGGCTACCTCAAGCAGCGCTCC 60808
| ||||| || || ||| | || || ||||| | || | | |||| || |||
Sbjct 3494 ACAGCCTGCACAAGGGCGACCGGGTGATCGTCACCGGCCGGTTGCGTCAA----CGGTCC 3439
Query 60809 TTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGC 60868
| ||||||| ||||| || ||||||||||| ||||||||||| |||||| |||||
Sbjct 3438 TACGAGACCCGCGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGACCGACGAGGTCGGC 3379
Query 60869 CCGTCGCTGCG 60879
|| ||||||||
Sbjct 3378 CCCTCGCTGCG 3368
>SEQ32968
Length=2597
Score = 145 bits (160), Expect = 4e-30
Identities = 204/283 (72%), Gaps = 9/283 (3%)
Strand=Plus/Minus
Query 60628 GGCCGTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG---CGACGCCCAGGGCAA 60684
||| ||||| |||||| ||||| ||| |||| | ||| || |||| | || ||
Sbjct 2120 GGCGGTCGCGAACTTCCGCGTCGCGTC-AACG--CCCCGTCGGTTCGACTCGAAGTCGAA 2064
Query 60685 C---TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGA 60741
| ||||||||||| || || |||||| |||||| | |||||||| | ||||||||
Sbjct 2063 CCAGTGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCCGCCGA 2004
Query 60742 GAACGTGGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCA 60801
|||||| ||| | ||| || || || | ||||| ||||| ||| || ||
Sbjct 2003 GAACGTCGCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGCTGCGCCA 1944
Query 60802 GCGCTCCTTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGA 60861
||| |||| ||| ||| ||||| || ||||||||||| ||||||||||||| |||||
Sbjct 1943 GCGGTCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTCGACGA 1884
Query 60862 GATCGGCCCGTCGCTGCGGTGGGCAACAGCTCGCGTGTCCAAG 60904
| |||||||||| || |||| || || || | || |||||
Sbjct 1883 GGTCGGCCCGTCTCTCCGGTACGCCACCGCACAGGTCGCCAAG 1841
>SEQ43844
Length=619
Score = 100 bits (110), Expect = 1e-16
Identities = 127/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 60707 TTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGGAAAGCCTCCAGAAA 60766
|||||| || || | | |||||| | || || |||||||||||| | ||||| || ||
Sbjct 151 TTCCTCACCTTCAACCTGTGGCGCCAGGCAGCGGAGAACGTGGCGAACAGCCTGCACAAG 210
Query 60767 GGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGC 60826
|| | || || ||||| ||| | ||| ||||| |||| |||| | ||| |||
Sbjct 211 GGTGACCGGGTGATCGTCGTCGGCAATCTCCGCCAGCGGTCCTACGAGTCGAAGACCGGC 270
Query 60827 GACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCCGTCGCTGCGGT 60881
|||| ||||||||| |||| | |||| |||||| ||||||| || || ||||
Sbjct 271 GACACGCGCACCGTGTACGAGATCGAGGCGGACGAGGTCGGCCCTTCCCTCCGGT 325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 244812761222035
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |