Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4983 134 9e-27 seq4710 111 1e-19 SEQ10860 89.7 3e-13 >seq4983 Length=3163 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||| ||||| ||||| || ||| | || |||| Sbjct 659 AGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCT 718 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 719 TCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCC 778 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| || ||| || || | ||| |||||| Sbjct 779 TGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACCTCCAAGGTAATGGTC 838 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||||||||||||||||| Sbjct 839 TTGCCAGTCAATGTCTTTACAAAGATCTGCAT 870 >seq4710 Length=78879 Score = 111 bits (122), Expect = 1e-19 Identities = 156/216 (72%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCAT 34823 ||| |||| ||| || ||| ||||||||| ||||| ||||| || || |||| ||| Sbjct 8617 CAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCGACCAT 8676 Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883 | ||||| ||||| || |||||||| || || ||||| ||| | || | || ||||||| Sbjct 8677 CCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGT 8736 Query 34884 CGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 | | || || || || || || || | ||| | ||| || || | ||| || Sbjct 8737 CTTGGATCTTAGCCTTCAC--ATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGAT 8794 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||| || |||||||| || ||||| ||||| Sbjct 8795 GGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCAT 8830 >SEQ10860 Length=7223 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || || || || || || || || ||||| |||| |||| |||||| ||||| || Sbjct 1489 CTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAA 1548 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || || || ||| | || | || || ||||| | || || |||||| Sbjct 1549 GATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATT 1608 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | ||||| |||| || |||||||| ||||||||||| || || Sbjct 1609 TTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAAC 1668 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 1669 GAAGATTTGCAT 1680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325509791688995