Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023552.1 Length=47162 Score E Sequences producing significant alignments: (Bits) Value seq6253 91.5 4e-14 SEQ27525 87.8 5e-13 >seq6253 Length=4700 Score = 91.5 bits (100), Expect = 4e-14 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 36403 CTGACTCTCACTGATCTGTTCTGTGGCGCTGGCGGTTCGAGCACCGGCGCGATCGAGATC 36462 || || ||| | || | ||||| || || ||||| || |||||| || |||| || Sbjct 4473 CTCACCCTCTCCGACTTCTTCTGCGGTGCCGGCGGATCCTCCACCGGAGCACTCGACGTC 4414 Query 36463 CCCGGTGTGGAGGTGCGCGTCGCGTCGAACCACTGGGACCTGGCCGTCGAGACGCACAAC 36522 ||||| || || || |||| ||| | | ||||||||| || |||||||| || ||| | Sbjct 4413 CCCGGCGTCGACGTCCGCGCCGCCGCCACCCACTGGGATCTCGCCGTCGAAACCCACCAG 4354 Query 36523 ACGAACCACCCGGACGCCGACCATGTGTGCGCCGA 36557 |||||||||||||||| || | |||||||| Sbjct 4353 CGCCACCACCCGGACGCCGAACACATCTGCGCCGA 4319 >SEQ27525 Length=13899 Score = 87.8 bits (96), Expect = 5e-13 Identities = 137/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 3012 GCGATCGAGTACCACGATCACCA-GATGGCGCTTGTCGCGCTGGCGCACTTCTTGAACCT 3070 ||||||| |||||||| | | | ||||||| | | ||||||||||||| ||||||| Sbjct 9806 GCGATCGCCTACCACGA-CTCGATGATGGCGAAGGCGGTGCTGGCGCACTTCCTGAACCT 9748 Query 3071 CGACGGCAAGGGCGGCAGCTACGCGCTGGCCAGCGTGCAGGCTGACACGTTCGTGCAGTC 3130 || |||||||||||| |||||| ||||| ||| | || |||| | ||||| Sbjct 9747 TGAGGGCAAGGGCGGCTCCTACGCCCTGGCGGAGACCCAGTCGGATCTGTTCATCCAGTC 9688 Query 3131 GGTGCAGACCGTCGCCGACGAGATCCGCGACGTCGCGCAGGC-GCACGTCGTCGAGGACA 3189 | |||||||| |||| ||| ||| ||| ||| || | |||| |||| || ||| Sbjct 9687 GCTGCAGACCATCGCGGACTGGATAGCGGACACCGC-CACCCAGCACATCGTGGAAGACC 9629 Query 3190 TTGTGGACGTC 3200 | || ||| || Sbjct 9628 TCGTTGACATC 9618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150714239223240