Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023554.1 Length=70841 Score E Sequences producing significant alignments: (Bits) Value seq2825 120 1e-22 >seq2825 Length=19190 Score = 120 bits (132), Expect = 1e-22 Identities = 381/585 (65%), Gaps = 28/585 (5%) Strand=Plus/Minus Query 46471 GGGTCTCGGCCCCGGTGTCGAGCGCGGTCAGGCTGACCAGCTTCATGGCCCTGGTGCTAC 46530 ||||||||||| ||| || |||| ||||||| || | || ||| || | | || || | Sbjct 6778 GGGTCTCGGCCTCGGCGTAGAGCTGGGTCAGGGTGGCGAGTTTCTTGTCGC-GGAGCATC 6720 Query 46531 CCGCC-AGGTCGAGCACCAGCGCGTCGTCCTTGTC------------------GGGGTAC 46571 ||| ||||||| ||||| |||||| |||||| || ||| Sbjct 6719 CCGGTGAGGTCGATGACCAGTGCGTCGGTCTTGTCCTGTCCGGTGTCCGGGTCGGTGTAG 6660 Query 46572 AGGCGCAGCGCC-CGGCCGACCATCTGGCTGTAGAGATTGCGGCTG--CGGGTCGGCCGC 46628 || || | |||| || ||||| || || | | || | || ||| | ||| || || Sbjct 6659 AGACGGA-CGCCACGTCCGACAATTTGCGCGAAAAG--TACGTCTGACCTGGTAGGACGT 6603 Query 46629 GCCAGCACCACCGTGTCGCACATCGGGAAGTCCGCGCCCTCGGTGAGCACCTGCACCGTG 46688 |||||||| || ||| || |||||||||||||||||||||||||||||||| ||| Sbjct 6602 GCCAGCACGACACAGTCACAGCGGGGGAAGTCCGCGCCCTCGGTGAGCACCTGCACAGTG 6543 Query 46689 ACCAGCGCGCGGGCGGTGCCGTCGCGGAACTGTTCGTACACGGGCAGCCGGTCGACGTAG 46748 |||| || ||| |||| ||||||||| ||| | | |||| || | | | Sbjct 6542 ACCATGGCCCGGATTTCGCCGCTGCGGAACTGGCGGTAGATTTCCTGCCGCTCCGCCTTG 6483 Query 46749 CTCATGGC-ACCGGTCACGGCCAGCGCGGGGAAGTCGGCGGCGGTGAGCGCGTCCGCGAT 46807 || |||| |||| ||| | | | | |||| || || ||||||||| || | || | Sbjct 6482 CT-GTGGCTGCCGGACACCGACCGGGTGGGGTAGCCGCGCGCGGTGAGCTCGGCGGCCAG 6424 Query 46808 GTGGTGGGCGGCGTCGACACTGGCCGCGAAGATGATGGGGCGGCGGTCGGCGGCGTGCAG 46867 | | | | ||||| | ||||||||||| ||| ||||||||||||||| | Sbjct 6423 CTCCTCGCCCTGCTCGACGGACACGGCGAAGATGATCGGGACGCGGTCGGCGGCGTGGCG 6364 Query 46868 CTTGATCGCATCCACGACGTACTGCGTGCAGGCTTCCATCACCTCGGCCAGCTCGCCCTG 46927 | || || ||| | | | | |||| ||| |||||| |||| ||| ||| Sbjct 6363 GAGCACGGCGTCGACGGTGGTCGGGATCGAGGCACGCATGACCTCGTCCAGGTCGGACTG 6304 Query 46928 GTGGAAGTCACCGGCCACGCTGCGCACGTCGTTGAGGGCGTCCAGGCCCTTGATGCGCAC 46987 | | |||| ||| | || | | | |||| || |||| || | || ||| Sbjct 6303 TTTGTAGTCTCCGCCGACCGTCTTGATCCGGGCGAGGAGGTTCAGGTGCTCGGTGACCAC 6244 Query 46988 CGTGAGGCCACGGGGCTGCACCAGGAAGCCCTTCTTGATGGCCCA 47032 || || || |||||| | || ||||| || || | ||| ||||| Sbjct 6243 GGTCAGCCCGCGGGGCGGGACGAGGAACCCGTTGTCGATCGCCCA 6199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 226439091277810