Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value SEQ46028 178 2e-39 >SEQ46028 Length=683 Score = 178 bits (196), Expect = 2e-39 Identities = 218/293 (74%), Gaps = 11/293 (4%) Strand=Plus/Minus Query 72108 GCAGGAGAAAGACTGGGCGAACTATCTATTCCAGGACGGGTCGATGATCGGTCTGAACAA 72167 |||||||| || || ||| | | || || | ||||| | ||||| ||||||||||| Sbjct 671 GCAGGAGATAGTGTGTGCGGAATTCCTGTTTCGCGACGGCTTTATGATTGGTCTGAACAA 612 Query 72168 AGAGATCGTGTGCCAGTACATCGAATACATCACCAACATCCGTATTCGCGCCATCGGTTA 72227 ||||||| |||||||||| | |||||||||||||| ||||| || | || |||| Sbjct 611 AGAGATCCTGTGCCAGTATGTGGAATACATCACCAATATCCGCATGCAGGCGGTCGG--- 555 Query 72228 CGATGACATCTACGCCGGTGTCAAA--GCT--AACCCAATCCCATGGATCAACTCCTGGT 72283 | || ||| |||| | || ||| ||||| ||||| |||||||| |||||| Sbjct 554 CCTTGG--TCT--GCCGTTCGAAACCCGCTCCAACCCGATCCCGTGGATCAATGCCTGGT 499 Query 72284 TGGTTTCTGACAACGTGCAAGTCGCTCCACAGGAAGTGGAAGTAAGTTCTTATCTGGTCG 72343 |||| || ||||||||||| || || || |||||||||||||| || ||||| ||||| | Sbjct 498 TGGTGTCCGACAACGTGCAGGTAGCGCCGCAGGAAGTGGAAGTGAGCTCTTACCTGGTTG 439 Query 72344 GTCAGATAGACTCGAAAGTGGACGCCAACGATTTCGACGATTTCCAACTGTAA 72396 | ||||| |||||| | | ||||| |||| | ||| ||| |||||||| Sbjct 438 GCCAGATCGACTCGGAGATCAACGCCGACGACCTGAGCGACTTCGAACTGTAA 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 866840940655200