Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_023603.1
Length=71565
Score E
Sequences producing significant alignments: (Bits) Value
seq2825 145 3e-30
>seq2825
Length=19190
Score = 145 bits (160), Expect = 3e-30
Identities = 401/607 (66%), Gaps = 26/607 (4%)
Strand=Plus/Minus
Query 44164 GTTCCCGTCCTCGTCCACCTCCTTGGCGTCGACGCCGG-GCAGCAGCTGGGTCAGGCTGA 44222
||| || || ||||| | ||||| || ||| | ||| | || |||||||||||| ||
Sbjct 6801 GTTGCCCTCGTCGTCGAACTCCTGGGTCTCGGCCTCGGCGTAG-AGCTGGGTCAGGGTGG 6743
Query 44223 CGAGCTTCATGTGGCGCGCCGACCCGGCGAGGTCGAGCACCAGGGCGTCGGTCTTG---- 44278
|||| ||| ||| ||| | ||||| |||||||| ||||| ||||||||||||
Sbjct 6742 CGAGTTTCTTGTCGCGGAGCATCCCGGTGAGGTCGATGACCAGTGCGTCGGTCTTGTCCT 6683
Query 44279 ---------CCGGG---GTGCAGGCGCAG-CGCC-CGGCCCACCATCTGGCTGTAGAGGT 44324
||||| ||| || | | |||| || || || || || | | ||
Sbjct 6682 GTCCGGTGTCCGGGTCGGTGTAGAGACGGACGCCACGTCCGACAATTTGCGCGAAAAGTA 6623
Query 44325 TCTTGGAGCGCGTCGGGCGGGCCAGGACCACCGTGTCGCACATGGGGAAGTCAGCGCCCT 44384
| || | || || || ||||| || || ||| || ||||||||| |||||||
Sbjct 6622 CGTCTGACCTGGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGTCCGCGCCCT 6563
Query 44385 CGGTGAGCACCTGGACGGTCACCAGGGCGCGGGTCTCACCCGAGCGGAACCGGCTGTAGA 44444
||||||||||||| || || |||| ||| ||| | || || ||||||| ||| |||||
Sbjct 6562 CGGTGAGCACCTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGGAACTGGCGGTAGA 6503
Query 44445 CCGGCTGACGCTCGGCGTAGGCCATCGC-GCCGGTCACGGCCTCGGCGGTGTACCCGACC 44503
||| ||||| || | || | || ||||| ||| | | || || ||| ||| |
Sbjct 6502 TTTCCTGCCGCTCCGCCT-TGCTGTGGCTGCCGGACACCGACCGGGTGGGGTAGCCGCGC 6444
Query 44504 GCGCTCAGCGAGTCAGCGATGTGGTGGGCGGCGTCGACCGAGGCGGCGAAGATGATGGGC 44563
||| | ||| | | || | | | | | ||||| || ||||||||||||| ||
Sbjct 6443 GCGGTGAGCTCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGAAGATGATCGGG 6384
Query 44564 TGGCGGTCCTTGGCGTGCAGCTCGATGGCGTCGACCACGTAGCTGG--TCGCGGCCTCCA 44621
|||||| |||||| | | ||||||||| || | || ||| ||| ||
Sbjct 6383 ACGCGGTCGGCGGCGTGGCGGAGCACGGCGTCGAC--GGTGGTCGGGATCGAGGCACGCA 6326
Query 44622 TCACCTCGGCCAGCTCGGCCTGATGGAAGTCACCGGCCACGTTCCGCACGTCATCGAGCT 44681
| |||||| |||| |||| ||| | | |||| ||| | || || | ||||
Sbjct 6325 TGACCTCGTCCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCCGGGCGAGGA 6266
Query 44682 TGTCCAGGCCCTTGATCTTCACGGTGAGGCCGTGAGGCTTGACGAGGAACCCCATCTTGA 44741
|| |||| || | | |||||| || ||| | ||| |||||||||||| | | ||
Sbjct 6265 GGTTCAGGTGCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACCCGTTGTCGA 6206
Query 44742 TCGCCCA 44748
|||||||
Sbjct 6205 TCGCCCA 6199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 228754589457030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |