Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023603.1 Length=71565 Score E Sequences producing significant alignments: (Bits) Value seq2825 145 3e-30 >seq2825 Length=19190 Score = 145 bits (160), Expect = 3e-30 Identities = 401/607 (66%), Gaps = 26/607 (4%) Strand=Plus/Minus Query 44164 GTTCCCGTCCTCGTCCACCTCCTTGGCGTCGACGCCGG-GCAGCAGCTGGGTCAGGCTGA 44222 ||| || || ||||| | ||||| || ||| | ||| | || |||||||||||| || Sbjct 6801 GTTGCCCTCGTCGTCGAACTCCTGGGTCTCGGCCTCGGCGTAG-AGCTGGGTCAGGGTGG 6743 Query 44223 CGAGCTTCATGTGGCGCGCCGACCCGGCGAGGTCGAGCACCAGGGCGTCGGTCTTG---- 44278 |||| ||| ||| ||| | ||||| |||||||| ||||| |||||||||||| Sbjct 6742 CGAGTTTCTTGTCGCGGAGCATCCCGGTGAGGTCGATGACCAGTGCGTCGGTCTTGTCCT 6683 Query 44279 ---------CCGGG---GTGCAGGCGCAG-CGCC-CGGCCCACCATCTGGCTGTAGAGGT 44324 ||||| ||| || | | |||| || || || || || | | || Sbjct 6682 GTCCGGTGTCCGGGTCGGTGTAGAGACGGACGCCACGTCCGACAATTTGCGCGAAAAGTA 6623 Query 44325 TCTTGGAGCGCGTCGGGCGGGCCAGGACCACCGTGTCGCACATGGGGAAGTCAGCGCCCT 44384 | || | || || || ||||| || || ||| || ||||||||| ||||||| Sbjct 6622 CGTCTGACCTGGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGTCCGCGCCCT 6563 Query 44385 CGGTGAGCACCTGGACGGTCACCAGGGCGCGGGTCTCACCCGAGCGGAACCGGCTGTAGA 44444 ||||||||||||| || || |||| ||| ||| | || || ||||||| ||| ||||| Sbjct 6562 CGGTGAGCACCTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGGAACTGGCGGTAGA 6503 Query 44445 CCGGCTGACGCTCGGCGTAGGCCATCGC-GCCGGTCACGGCCTCGGCGGTGTACCCGACC 44503 ||| ||||| || | || | || ||||| ||| | | || || ||| ||| | Sbjct 6502 TTTCCTGCCGCTCCGCCT-TGCTGTGGCTGCCGGACACCGACCGGGTGGGGTAGCCGCGC 6444 Query 44504 GCGCTCAGCGAGTCAGCGATGTGGTGGGCGGCGTCGACCGAGGCGGCGAAGATGATGGGC 44563 ||| | ||| | | || | | | | | ||||| || ||||||||||||| || Sbjct 6443 GCGGTGAGCTCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGAAGATGATCGGG 6384 Query 44564 TGGCGGTCCTTGGCGTGCAGCTCGATGGCGTCGACCACGTAGCTGG--TCGCGGCCTCCA 44621 |||||| |||||| | | ||||||||| || | || ||| ||| || Sbjct 6383 ACGCGGTCGGCGGCGTGGCGGAGCACGGCGTCGAC--GGTGGTCGGGATCGAGGCACGCA 6326 Query 44622 TCACCTCGGCCAGCTCGGCCTGATGGAAGTCACCGGCCACGTTCCGCACGTCATCGAGCT 44681 | |||||| |||| |||| ||| | | |||| ||| | || || | |||| Sbjct 6325 TGACCTCGTCCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCCGGGCGAGGA 6266 Query 44682 TGTCCAGGCCCTTGATCTTCACGGTGAGGCCGTGAGGCTTGACGAGGAACCCCATCTTGA 44741 || |||| || | | |||||| || ||| | ||| |||||||||||| | | || Sbjct 6265 GGTTCAGGTGCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACCCGTTGTCGA 6206 Query 44742 TCGCCCA 44748 ||||||| Sbjct 6205 TCGCCCA 6199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228754589457030