Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023604.1 Length=44306 Score E Sequences producing significant alignments: (Bits) Value seq963 120 9e-23 >seq963 Length=26998 Score = 120 bits (132), Expect = 9e-23 Identities = 186/263 (71%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 24450 CGGGATCGACTTCGAGGCGGACGACGGGACGCCGATCTATGCGT-CGCAGGCCGGCACCG 24508 ||| | |||||||| || | |||||| || || |||| || | ||| || ||||| | Sbjct 21944 CGGCACCGACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGG-GGCACAG 22002 Query 24509 TCGCGCATATCGGCTCGGCGTCCGGCTTCGGGCAGTGGATCGTGATTGATCATCCGGCCG 24568 || | |||||| | || ||||| ||| |||||||| || | || || |||| | Sbjct 22003 TCCTCTACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCACCCGGACA 22062 Query 24569 AAGACGGCGCCGGCACGACCGTTTACGGGCACATGTGGAACGCGTTCGCGACGGGGCTCC 24628 || |||| |||| ||||| ||||| || |||||| |||| | |||||| || || | Sbjct 22063 GTGAGGGCGGCGGCGTGACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGC 22122 Query 24629 GCGCCGGCCAACGCGTCGCGGCCGGCCAACTGATCGGCTACGTCGGCTCGAACGGCGAGT 24688 || || | || | || || || || |||||||||||||| ||||| || || Sbjct 22123 AGCAGGGGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGG 22182 Query 24689 CGACGGGCCCGCACCTGCACTTC 24711 |||| ||||||||||| ||| || Sbjct 22183 CGACCGGCCCGCACCTTCACCTC 22205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141580042906680