Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value SEQ45334 253 3e-62 >SEQ45334 Length=507 Score = 253 bits (280), Expect = 3e-62 Identities = 270/352 (77%), Gaps = 12/352 (3%) Strand=Plus/Minus Query 87448 TCACACTGAGCCACGTCTCCGTTAACAATCACGGTCACGTTCTCACCCAGACGTGTCAGG 87507 || ||||| | |||||| |||||||| || || |||||||| || ||||| || |||||| Sbjct 400 TCGCACTGGGTCACGTCGCCGTTAACGATAACCGTCACGTTTTCCCCCAGGCGGGTCAGG 341 Query 87508 AACATTTTCATCTG--TGCCTTGGTTACGTTCTGGGCTTCGTCCAGGATAACTACCGCGT 87565 |||||||||||||| || | ||| |||||||||||||| ||||||||||| ||||| | Sbjct 340 AACATTTTCATCTGGCTGGC--GGTCACGTTCTGGGCTTCATCCAGGATAACGACCGCAT 283 Query 87566 TCTCAAACGTGCGGCCACGCATATACGCGAAGGGAGCAATTTCCACCTTCTTCACATCCG 87625 | || || ||||| || |||||||| ||||| || ||||| || ||||| | |||| Sbjct 282 TTTCGAAGGTGCGTCCGCGCATATAAGCGAACGGCGCAATCTCTACCTTGCCGATTTCCG 223 Query 87626 GGCGCAAGCAGTACTG----AAGGAACGTACCACCAAGGCGTTTCTCCAGGATGTCTTGA 87681 |||||| ||||||||| |||||| | || | | ||| |||| ||||| | Sbjct 222 GGCGCAGGCAGTACTGCATAAAGGAA-GATCCTAAACGACGT---ACCAGAATGTCATAC 167 Query 87682 ACCGGGCGGAAATACGGGGCGAATTTCTCGCTGATGTCCCCAGGCAAGAAGCCCAGGTTC 87741 |||||||||||||| |||||||| |||||| ||| ||||| |||||||| || |||| Sbjct 166 ACCGGGCGGAAATAAGGGGCGAACTTCTCGGAGATATCCCCCGGCAAGAAACCGAGGTCT 107 Query 87742 TCACCGGACTCTAAGACAGGACGCGTCACGATGATGCGCTCCACCTCTTTAT 87793 ||| | | || | ||||||| || ||| | || | |||| ||||||||| Sbjct 106 TCATCCGCCTGCATATCAGGACGGGTAACGCTTATCCTCTCCTCCTCTTTAT 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698154212984200