Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq61 154 1e-32 SEQ10860 111 2e-19 >seq61 Length=55249 Score = 154 bits (170), Expect = 1e-32 Identities = 540/833 (65%), Gaps = 30/833 (4%) Strand=Plus/Minus Query 150995 GCCAGTTCGTAACTGGCCTCGAGCGCAGCATGATACACAGTTTCAGCAATTTGTTTATTC 151054 ||||| || |||||||||| || ||| ||| || | ||||| || || | ||| Sbjct 27387 GCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTG 27328 Query 151055 AATAGAACGGCAGCATCGCTCACGTACGGTATGCGCAACATAACAAATGCATCGGCCAAA 151114 | | ||||| || ||| | || || | |||| || || || || ||||| || Sbjct 27327 AGCAATACGGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTAAGGCGTCGGCAAAG 27268 Query 151115 CCTTGAATGCCTATGCCGATGGGACGATGGCGCATATTAGAtttttttGCAGTTTCAATA 151174 || |||| ||| ||||| ||||||||||| | | ||| ||||| ||||| | Sbjct 27267 CCCTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTTTGCCTCGGGCAGC 27208 Query 151175 GGGTAGAAATTGCGATCAATAATTTTATTCAAACTATTCACTACATGTTTGACCACAGTG 151234 || ||| ||||| |||||| ||||| |||||| | | ||| ||| || Sbjct 27207 GGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGTTTTAGTAACTTCC 27148 Query 151235 TGCAATAGTTGAAAATCAAAAGTATCATT---ATTGATATATTTATTGACGGCAATCGAC 151291 | || | | ||||| || || | | | | | | | |||| | ||| ||||| Sbjct 27147 TTCAGTTTCTTGAAATCGAATGTTTTCTCTGAAGTCACAAACATATTCAAGGCTATCGAT 27088 Query 151292 GCTAGATTACATACGGCAGTTTCGTCGGGCGCGCAATATTGTACTATTTCCGCACACAAA 151351 || | ||| || |||||| | || ||||| || |||||| || ||||| | || | Sbjct 27087 GCCAAATTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCAGTGCAGAGG 27028 Query 151352 TTGCTGCATTTTATCAATCCGCAATTACTTTGATTGCTTTTGCGGTTGCAAGCGTCCTTG 151411 ||||||||||| || || ||| |||||||| || | |||||||| ||||||| Sbjct 27027 TTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCCTTG 26968 Query 151412 TATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTATAATG--TTTC----GCATT 151465 | | ||||||||| ||||| || || ||||| ||| | |||| | | | || Sbjct 26967 AAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAGAGTT 26908 Query 151466 AATG---TAACCGCGGGCATTTGCTCGCGAAACTGGCCTTTATCCTCATAATGTTTGTAC 151522 || ||| | | | ||||| ||||| || || ||| || | | | ||| Sbjct 26907 TGTGCTTTAATCACACG-ATTTG--CGCGACCCTCGC------TCTCGTACTTTGTATAC 26857 Query 151523 CAGTATTCAAAGTCAT--CACCATACGTATCGTTGAGCTTAGGACACTCGTTAGGACACA 151580 | |||||||||| | ||| ||| || | | ||||||| || |||||||| Sbjct 26856 AGCTTCTCAAAGTCATCCCCCCAAACG--TCTTCCAAGCCGGGACACTTGTGAGGACACA 26799 Query 151581 TTAATGACCATATAC-CGTTTTCTTCAACGCGTTTCATAAATATATCCGGAACCCATAAT 151639 | ||||| || | | || | || || || |||||||| | ||| || | ||| || Sbjct 26798 ACAGCGACCA-ATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAG 26740 Query 151640 GCGTTCATCAAATCACGCGCTTTGGTGTCTTCGCTGCCAATGTTTCGACGCATGTGTAAA 151699 |||| | | |||||| ||| || ||||| |||| |||| | || || Sbjct 26739 GCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCCAAG 26680 Query 151700 ACGTCCATAATGTCGCAATGCCACGGTTCAACGTACACTGCTTGGGCGCCTTTTCGCTT- 151758 | || | || ||| ||||||| ||||| | ||| | || |||||| |||||| Sbjct 26679 AACTCAAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGCTTG 26620 Query 151759 --GCCACCTTGATCCACGTGACGCACCATATTATTAAAAACTCGCAGCATTGG 151809 |||||||||||| || | ||| ||| ||||||||| |||| ||||| || Sbjct 26619 CCGCCACCTTGATCGACATAACGAGCCACATTATTAAACACTCTGAGCATGGG 26567 >SEQ10860 Length=7223 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || || || | |||||| |||||||| || ||||||||| | |||| | ||||| Sbjct 1472 ACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCC 1531 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 | ||| || || ||| |||||| ||| || ||||| ||||| || ||||||||||| | Sbjct 1532 AATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGA 1591 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 || || ||| | | ||| | || || | ||||| || |||| ||| | ||||| Sbjct 1592 ATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTA 1651 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || | ||||| ||||| |||||||| Sbjct 1652 CCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488262445986000