Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023696.1 Length=157568 Score E Sequences producing significant alignments: (Bits) Value SEQ29447 141 9e-29 SEQ32872 131 2e-25 SEQ26880 120 3e-22 >SEQ29447 Length=7397 Score = 141 bits (156), Expect = 9e-29 Identities = 114/137 (83%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 79254 ATGTACGCCAACAATGCGGTGCCGGAGTCGCTGAACTTCCCGCACGACGCCATTGGCAGT 79313 |||||||||| ||||||||| |||||||||||||||| |||||||||||| || || || Sbjct 5605 ATGTACGCCAGCAATGCGGTTCCGGAGTCGCTGAACTACCCGCACGACGCGATCGGGAGC 5546 Query 79314 GACCATGACTCGGTCGGCCTGTTCCAGCAGCGTCCGTCC---TGGGGCACGGTGGCCCAG 79370 |||||||| || |||| |||||||||||||||| | || |||||||| || || ||| Sbjct 5545 GACCATGATTCCATCGGTCTGTTCCAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACAG 5486 Query 79371 CGGATGAACCCGCGCGA 79387 || ||| | |||| ||| Sbjct 5485 CGTATGGATCCGCACGA 5469 >SEQ32872 Length=2637 Score = 131 bits (144), Expect = 2e-25 Identities = 116/145 (80%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 118179 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 118238 ||||||||||||||||||||||| ||| | |||||| |||||| || |||||| Sbjct 191 CGGCCCGGGCCGTGGCTCCGCCGCCGGCGCCCTGGTCGCCTACGCACTGACGATCACCAA 250 Query 118239 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCCGA 118298 |||||||| ||| || ||| |||||||||||||| || |||||||||| |||||| Sbjct 251 CATCGACCCCATCGAGCACGGGCTGATGTTCGAGCGATTCCTCAACCCGGAACGCCCCTC 310 Query 118299 CTTCCCCGACATCGACGTCGACTTC 118323 | |||||| |||||| |||||||| Sbjct 311 CGCCCCCGATATCGACATCGACTTC 335 >SEQ26880 Length=5820 Score = 120 bits (132), Expect = 3e-22 Identities = 229/337 (68%), Gaps = 24/337 (7%) Strand=Plus/Minus Query 145624 AGGGCATTGTCATCGCGCTCGCCGTCGCCCTGGTCGAGACCAACCTCAAGATGTACGCCA 145683 |||||||| ||||| |||||| ||| ||||| ||| | | | ||||||||||||| Sbjct 1561 AGGGCATTAAAATCGCCCTCGCCACCGCACTGGTGGAGTCAGGCATGAAGATGTACGCCA 1502 Query 145684 ATCGGTCGGACCCGGAGAGCCTCAACTTCCCGCACGACGCGGTCGGCAGCGACGCCAACA 145743 | | | ||| || ||| | | |||||||| ||||| ||||||||| ||||||| || Sbjct 1501 ACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTCGGCGGCGACGCGGACT 1442 Query 145744 GCGTCGGCGTCTTCCAGCAGCGCG---CTCCCTGGTGGGGCACGGTCGCCGATCGCATGG 145800 |||||| | ||||||||||||| | | ||||||||| ||| || ||||||| Sbjct 1441 CGGTCGGCCTTTTCCAGCAGCGCGACAATGGCGCGTGGGGCACCATCGAAGACCGCATGG 1382 Query 145801 ACGTCGCGCGCAGCGCGGCGATGTTCTACAACAGCCTGTATCGCCAGCGCGTCGGCGGCG 145860 || | ||| ||| | ||||||||| || || | ||| || || Sbjct 1381 ACCCTGAGCGGTCCGCCGGAATGTTCTACGAC-----GT----------CCTCGACGACG 1337 Query 145861 CCGACTACAACACCGATCGGGTCTCTCCCGGCACCTGGGGCCAGATGGTCCAGCAGTCCG 145920 | ||||||||||||| | | | || ||| || | ||| || |||| ||| | Sbjct 1336 CGGACTACAACACCG---GCGAC---CCGGGCGCCCACGCGCAGCGCGTGCAGCGGTCAG 1283 Query 145921 CCTTTCCGGATCGCTACGACAAACGTATGGCCGAGGC 145957 | ||||| || |||||| ||| |||| |||||| Sbjct 1282 CATTTCCCGACCGCTACAACACGAAGATGGGCGAGGC 1246 Score = 89.7 bits (98), Expect = 5e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 79254 ATGTACGCCAACAATGCGGTGCCGGAGTCGCTGAACTTCCCGCACGACGCCATTGGCAGT 79313 |||||||||||| |||||||| ||||| |||||||||| ||||| || | ||| | Sbjct 1511 ATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTCGGCGGC 1452 Query 79314 GACCATGACTCGGTCGGCCTGTTCCAGCAGCG 79345 ||| |||||||||||||| ||||||||||| Sbjct 1451 GACGCGGACTCGGTCGGCCTTTTCCAGCAGCG 1420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503799086862400