Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023697.1 Length=48420 Score E Sequences producing significant alignments: (Bits) Value SEQ29893 120 9e-23 SEQ39420 96.9 1e-15 >SEQ29893 Length=4967 Score = 120 bits (132), Expect = 9e-23 Identities = 155/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 13721 TGGAACGCGATTGCGCAGGGCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGGC 13780 ||| || | || || ||| |||| || |||||||||| |||||||||||||||||| Sbjct 2016 TGGGACACCATCGCCCAGTGCGAGTCCACCGGCAACTGGGCCATCAACACCGGCAACGGT 1957 Query 13781 TACTACGGCGGTCTGCAGTTCAAGCAGTCGAGCTGGGA-GGCTGCGGGCGGCACCAACTA 13839 | | | ||||| || ||||||| | |||| ||||| |||| ||| ||||||| | || Sbjct 1956 TTCAAGGGCGGCCTCCAGTTCACCGACTCGACCTGGGCCGGCTTCGG-CGGCACCGAGTA 1898 Query 13840 CGCGCCGCGCGCCGACCTCGCCACGCCGT-ACCAGCAGGCCCTGGTCGCCGAGAACCTGC 13898 ||| ||| ||||||||| ||||| |||| | |||||| | ||||||||||| | | Sbjct 1897 CGCCCCGAGCGCCGACCAGGCCAC-CCGTGAGCAGCAGATCGCCGTCGCCGAGAAGGTCC 1839 Query 13899 TCGCGCAGCAGGGCCCCGGCGCGTGGCCG 13927 ||| |||||| || || |||||| Sbjct 1838 AGGCGGCCCAGGGCTGGGGAGCCTGGCCG 1810 >SEQ39420 Length=1360 Score = 96.9 bits (106), Expect = 1e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 13719 ACTGGAACGCGATTGCGCAGGGCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACG 13778 ||||| || | | || ||| |||| || |||||| ||||||||||||||||||| |||| Sbjct 1016 ACTGGGACAAGCTCGCCCAGTGCGAGTCCGGCGGCGACTGGCACATCAACACCGGTAACG 957 Query 13779 GCTACTACGGCGGTCTGCAGTTCAAGCAGTCGAGCTGGGAGGCTGCGGGCGGCACCAACT 13838 ||||| | || || ||||||||||| || |||| | || |||||| | | | Sbjct 956 GCTACCAGGGTGGCCTGCAGTTCAACGCCCAGACCTGGAACGCCAACGGCGGCGGCGAGT 897 Query 13839 ACGCGCCGCGCGCCGACCTCGCCACGCCGTACCAGCAGGCCCTGGTCGCCGAGAACCTGC 13898 ||| | |||||||| ||| | | | |||||| | | ||||||||| | | | Sbjct 896 TCGCCTCCACCGCCGACCAGGCCTCCCGCGAGCAGCAGATCGTCGTCGCCGAGCGCGTCC 837 Query 13899 TCGCGCAGCAGGGCCCCGGCGCGTGGCC 13926 |||| |||||| ||||| ||||| Sbjct 836 TCGCCTCCCAGGGCTGGGGCGCCTGGCC 809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154737635219820