Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023703.1 Length=64613 Score E Sequences producing significant alignments: (Bits) Value seq6253 185 4e-42 >seq6253 Length=4700 Score = 185 bits (204), Expect = 4e-42 Identities = 372/548 (68%), Gaps = 8/548 (1%) Strand=Plus/Minus Query 54228 CTGACTCTCACCGATCTGTTCTGCGGCGCTGGTGGTTCGAGCACTGGCGCGATCGAGATC 54287 || || ||| |||| | |||||||| || || || || ||| || || |||| || Sbjct 4473 CTCACCCTCTCCGACTTCTTCTGCGGTGCCGGCGGATCCTCCACCGGAGCACTCGACGTC 4414 Query 54288 CCCGGTGTGGAGGTTCGCGTCGCGTCGAACCACTGGGACCTGGCCGTCGAAACGCACAAC 54347 ||||| || || || |||| ||| | | ||||||||| || ||||||||||| ||| | Sbjct 4413 CCCGGCGTCGACGTCCGCGCCGCCGCCACCCACTGGGATCTCGCCGTCGAAACCCACCAG 4354 Query 54348 ACGAACCACCCGGACGCCGACCACCTGTGCGCCGATCTGTCGCAGATCGACCCGCGCCGG 54407 |||||||||||||||| ||| | |||||||| | ||| ||| ||| || | Sbjct 4353 CGCCACCACCCGGACGCCGAACACATCTGCGCCGACATCAGCCAGTACGAGCCGAGCTTG 4294 Query 54408 TTCCCGCGCACCGACATCCTGTGGGCGAGCCCGGAGTGCACGAATCACTCGGTGGCCAAG 54467 ||||| | ||| ||| || ||| ||| ||||| | ||| ||||||| || Sbjct 4293 TTCCCCCACACGGACCTCGCCTGGTTCTCCCCCTCCTGCACCAGCCACACGGTGGCGCAG 4234 Query 54468 GGCCGCAAGCGCGTCGACTCG-CAGCCCGATCTGTTCGGGGAGGTGC-----TGCCCGAC 54521 ||| || | |||| | | ||| | || | |||| | | |||||| Sbjct 4233 GGCATGGCCCGTGCCGACCGGGCCGCCGCCTACGTCCTCGGAGAAACCCCCCTCCCCGAC 4174 Query 54522 GCGGCGGCCGAGCGGTCCCGTGCCACGATGTGGGACGTGCCCCGGTTCGCCGAGGCGCAC 54581 | ||| ||| || ||||| ||||| |||||||||||| || ||| ||||| ||| Sbjct 4173 GACGCGCACGAACGATCCCGCGCCACCATGTGGGACGTGGTGCGCTTCACCGAGTACCAC 4114 Query 54582 CACTACCAGGCCGTCATCGTCGAGAACGTCGTGGACGCGTGGCACTGGCAGCCGTTCCAG 54641 |||||| || ||||| |||||||||||| || | | ||| ||| |||| Sbjct 4113 CACTACGCCGCGGTCATTGTCGAGAACGTCACCGAGGTCACCAAGTGGGCGCCATTCCCC 4054 Query 54642 GCGTGGCTGATGGCGATGGACTCGCTGGGCTACGAGCACCACATCGTGTTCCTGAACTCG 54701 |||||| | ||||||||||| |||| |||||| |||||| ||| || | || ||| Sbjct 4053 GCGTGGATCATGGCGATGGAAGCGCTCGGCTACAAGCACCGCATTGTCATGCTCAACAGC 3994 Query 54702 ATGCACGCGCAGGC-GTTCGGGCTGGGGGCGCCGCAGTCACGGGACCGCATGTACGTGGT 54760 |||||||| | | | || ||| | | || |||| || || ||||| | ||| || Sbjct 3993 ATGCACGC-CGGCCTGTACGGCCCCGCCGCCGCGCAATCCCGCGACCGGTTCTACTGCGT 3935 Query 54761 GTTCTGGC 54768 |||||||| Sbjct 3934 GTTCTGGC 3927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 206520689813470