Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023711.1 Length=68720 Score E Sequences producing significant alignments: (Bits) Value seq963 149 3e-31 seq2825 136 2e-27 >seq963 Length=26998 Score = 149 bits (164), Expect = 3e-31 Identities = 186/257 (72%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 40039 CGATTTCGCCGCCAAGGACGGCACACCGATCTACGCC-GCGCAGGGCGGCACCGTGGCCT 40097 ||| ||||||||| |||||||| || |||||||| |||| ||| ||||| || || Sbjct 21950 CGACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGG-GGCACAGTCCTCT 22008 Query 40098 ACATCGGCAGAGCCGACGGTTTCGGGCAATGGATCGTGATCGACCACCNNNNNNNNNNNN 40157 |||||||| ||| ||| | ||| || ||||| || ||||||||| Sbjct 22009 ACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCACCCGGACAGTGAGG 22068 Query 40158 NTGGCGGCACGACCGTCTACGGACACATGTGGGACGCGTTCGCCACCGGACTACGTCAAG 40217 |||||| ||||| ||||| || ||||||||||| | ||| || || || | || | Sbjct 22069 GCGGCGGCGTGACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGCAGCAGG 22128 Query 40218 GGCAGCGCGTCGAGGCCGGGCAGCTCATCGCCTACGTCGGCACGAACGGTCAATCGACCG 40277 ||||| | || || || || |||||||||| ||||||||| |||| ||||| |||||| Sbjct 22129 GGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGGCGACCG 22188 Query 40278 GCCCACATCTGCACTTC 40294 |||| || || ||| || Sbjct 22189 GCCCGCACCTTCACCTC 22205 >seq2825 Length=19190 Score = 136 bits (150), Expect = 2e-27 Identities = 284/418 (68%), Gaps = 8/418 (2%) Strand=Plus/Minus Query 45543 GGTGGGCCGGGCCAGCACGACGCAGTCACACATCGGGAAATCGGCACCCTCGGTGAGCAC 45602 ||| || || ||||||||||| |||||||| ||||| || || |||||||||||||| Sbjct 6612 GGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGTCCGCGCCCTCGGTGAGCAC 6553 Query 45603 CTGCACAGTGACCAGCGCCTTGGCGGTGCCGTTTCGGTACGCCTCGTATACGGGCTGGCG 45662 |||||||||||||| ||| | |||| | ||| || ||| | ||| || Sbjct 6552 CTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGGAACTGGCGGTAGATTTCCTGCCG 6493 Query 45663 CTCGGCGTAGCTCATCGAGCCGGTGACGGCGACGGCG-GGGAAATCGGCG-GCGGTCAGT 45720 ||| || | ||| ||||| || |||| | | ||| | | ||| ||||| || Sbjct 6492 CTCCGCCTTGCTGTGGCTGCCGGACAC--CGACCGGGTGGGGTAGCCGCGCGCGGTGAGC 6435 Query 45721 GCGTCGGCGATGTGGTGGGCNNCGTCGACCGACGCGGCGAAGATGATCGGGCGGCGGTCG 45780 || |||| | | | | | ||||| ||| ||||||||||||||||| ||||||| Sbjct 6434 TCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGAAGATGATCGGGACGCGGTCG 6375 Query 45781 GCGGCGTGCAGCTTGATCGCGTCGACCACGTACTCGG--TGGCGGCTTCCATGACCTCGG 45838 |||||||| | | |||||||| || |||| | | ||| |||||||||| Sbjct 6374 GCGGCGTGGCGGAGCACGGCGTCGAC--GGTGGTCGGGATCGAGGCACGCATGACCTCGT 6317 Query 45839 CGAGGTCGGACTGCTGGAAATCACCGGCGACGGTGCGCACGTCATCGAGGGCGTTGAGGT 45898 | ||||||||||| | | | || ||| |||| || | ||||| ||| |||| Sbjct 6316 CCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCCGGGCGAGGAGGTTCAGGT 6257 Query 45899 TATTGATGCGGACGGTCAGACCGCGCGGGCGCACGAGGTAGCCAGAGTCGATGGCCCA 45956 | | || |||||||| ||||| || | |||||| | || |||||| ||||| Sbjct 6256 GCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACCCGTTGTCGATCGCCCA 6199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 219655705037305