Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023722.1 Length=59231 Score E Sequences producing significant alignments: (Bits) Value SEQ29447 159 1e-34 SEQ36660 122 3e-23 >SEQ29447 Length=7397 Score = 159 bits (176), Expect = 1e-34 Identities = 199/266 (75%), Gaps = 10/266 (4%) Strand=Plus/Minus Query 23244 GAAGCCGATTAACTTCATGATCGGCACCGTCTACAACAACGGCATCGCCAAGGCGTGGAA 23303 ||||||||| |||||||||||| | ||||||||||| ||||||| ||| |||||||| Sbjct 7364 GAAGCCGATCAACTTCATGATCAACTCCGTCTACAACGCCGGCATCCTCAATGCGTGGAA 7305 Query 23304 CAAGGTCGCGGAGTTCATCCCCGGCCTGGTGAAGGC--GCCGACGATGGACCTG--ATCC 23359 || | |||| ||||||||||||| ||| |||| ||| | ||| ||| |||| Sbjct 7304 CACCGGCGCGAAGTTCATCCCCGGGCTGAATGAGGCAAGCC--CCCTGG--CTGGCATCC 7249 Query 23360 CCGAGTACGCGACCGGTGGTGCGATCCGCGGCCCCGGCTCCGGCACGTCTGACGACATCT 23419 ||||| |||| | |||||||||||||||||| || ||| |||||| || ||||| | Sbjct 7248 CCGAGCACGCCAACGGTGGTGCGATCCGCGGTCCGGGCGACGGCACCTCGGACGATGTGC 7189 Query 23420 TCGCCAAGCTCTCGAACGGTGAGCACGTCGTCACCGCCGAGGAGGTCCGGCGCGC-GGGC 23478 || | ||| ||||| |||||| | ||||||| | |||||| || ||| | ||| Sbjct 7188 TCATGTGGGGCTCCAACGGCGAGCACATGCTCACCGCGGCGGAGGT-CGACGCTCTCGGC 7130 Query 23479 GGTCAGTCCGCCGTCTACGCGATCCG 23504 || ||| ||||| ||||| || || Sbjct 7129 GGGCAGGGTGCCGTGTACGCCATGCG 7104 >SEQ36660 Length=2529 Score = 122 bits (134), Expect = 3e-23 Identities = 212/303 (70%), Gaps = 19/303 (6%) Strand=Plus/Plus Query 32482 CACTGGGGGACCGACTTCGGCCGCGAAGGCGGATCCGGAGGGAACCCCGTCTATGCCGTG 32541 |||||||| || ||||||||| | ||||| || || || |||| |||| || ||| Sbjct 433 CACTGGGGCACTGACTTCGGCAATGGTGGCGGGTCTGGCGGTCACCCGATCTACGCGGTG 492 Query 32542 AAGGACGGGACAATCGTCGCCGCCGGTCCCGCGTCGGGGTTCGGTCAGTGGGTCCTCGTC 32601 |||||||| || || | ||||||| | ||||| || ||||| |||||| || ||| Sbjct 493 AAGGACGGCACTGTCACCCGCGCCGGTGCGGCGTCTGGCTTCGGCCAGTGGATCACCGTG 552 Query 32602 GACCACCCGACCGCCGTC----GGTGGCGGGACCACGGTCTACGGGCACGTCATCCCCGA 32657 || |||| ||| |||| ||||||||| ||||||||| || | ||||||||| Sbjct 553 GATCACC---CCG-CGTCGAATGGTGGCGGGCTCACGGTCTATGGCC----CATCCCCGA 604 Query 32658 GGTGCGCGTCGGACAGGAGGTCCGCGCCGGCGACCGGATCGCGCGGGTCCACCCGACGAA 32717 ||| |||||| |||| ||| | || | || |||| || || |||| ||| Sbjct 605 GGTCACCGTCGGGCAGGCGGTGGTGGAGGGGCAGCGTATCGGCCGCATCAACCC--CGA- 661 Query 32718 GTCGCCGGG--GAACGGCAACGTCGATCCACACCTCCATCTGGAATGGCACCGGTACGTC 32775 | || || ||||| |||| || ||||| || ||||| |||||||| ||||| Sbjct 662 --CTCCAGGACCAACGGTGGGGTCGCCCCGCACCTGCACCTGGAGTGGCACCGCTACGTG 719 Query 32776 TGG 32778 ||| Sbjct 720 TGG 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189313894455930