Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_023725.1
Length=156646
Score E
Sequences producing significant alignments: (Bits) Value
SEQ29447 141 9e-29
SEQ32872 131 2e-25
SEQ26880 120 3e-22
>SEQ29447
Length=7397
Score = 141 bits (156), Expect = 9e-29
Identities = 114/137 (83%), Gaps = 3/137 (2%)
Strand=Plus/Minus
Query 77986 ATGTACGCCAACAATGCGGTGCCGGAGTCGCTGAACTTCCCGCACGACGCCATTGGCAGT 78045
|||||||||| ||||||||| |||||||||||||||| |||||||||||| || || ||
Sbjct 5605 ATGTACGCCAGCAATGCGGTTCCGGAGTCGCTGAACTACCCGCACGACGCGATCGGGAGC 5546
Query 78046 GACCATGACTCGGTCGGCCTGTTCCAGCAGCGTCCGTCC---TGGGGCACGGTGGCCCAG 78102
|||||||| || |||| |||||||||||||||| | || |||||||| || || |||
Sbjct 5545 GACCATGATTCCATCGGTCTGTTCCAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACAG 5486
Query 78103 CGGATGAACCCGCGCGA 78119
|| ||| | |||| |||
Sbjct 5485 CGTATGGATCCGCACGA 5469
>SEQ32872
Length=2637
Score = 131 bits (144), Expect = 2e-25
Identities = 116/145 (80%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 115940 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 115999
||||||||||||||||||||||| ||| | |||||| |||||| || ||||||
Sbjct 191 CGGCCCGGGCCGTGGCTCCGCCGCCGGCGCCCTGGTCGCCTACGCACTGACGATCACCAA 250
Query 116000 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCCGA 116059
|||||||| ||| || ||| |||||||||||||| || |||||||||| ||||||
Sbjct 251 CATCGACCCCATCGAGCACGGGCTGATGTTCGAGCGATTCCTCAACCCGGAACGCCCCTC 310
Query 116060 CTTCCCCGACATCGACGTCGACTTC 116084
| |||||| |||||| ||||||||
Sbjct 311 CGCCCCCGATATCGACATCGACTTC 335
>SEQ26880
Length=5820
Score = 120 bits (132), Expect = 3e-22
Identities = 229/337 (68%), Gaps = 24/337 (7%)
Strand=Plus/Minus
Query 143871 AGGGCATTGTCATCGCGCTCGCCGTCGCCCTGGTCGAGACCAACCTCAAGATGTACGCCA 143930
|||||||| ||||| |||||| ||| ||||| ||| | | | |||||||||||||
Sbjct 1561 AGGGCATTAAAATCGCCCTCGCCACCGCACTGGTGGAGTCAGGCATGAAGATGTACGCCA 1502
Query 143931 ATCGGTCGGACCCGGAGAGCCTCAACTTCCCGCACGACGCGGTCGGCAGCGACGCCAACA 143990
| | | ||| || ||| | | |||||||| ||||| ||||||||| ||||||| ||
Sbjct 1501 ACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTCGGCGGCGACGCGGACT 1442
Query 143991 GCGTCGGCGTCTTCCAGCAGCGCG---CTCCCTGGTGGGGCACGGTCGCCGATCGCATGG 144047
|||||| | ||||||||||||| | | ||||||||| ||| || |||||||
Sbjct 1441 CGGTCGGCCTTTTCCAGCAGCGCGACAATGGCGCGTGGGGCACCATCGAAGACCGCATGG 1382
Query 144048 ACGTCGCGCGCAGCGCGGCGATGTTCTACAACAGCCTGTATCGCCAGCGCGTCGGCGGCG 144107
|| | ||| ||| | ||||||||| || || | ||| || ||
Sbjct 1381 ACCCTGAGCGGTCCGCCGGAATGTTCTACGAC-----GT----------CCTCGACGACG 1337
Query 144108 CCGACTACAACACCGATCGGGTCTCTCCCGGCACCTGGGGCCAGATGGTCCAGCAGTCCG 144167
| ||||||||||||| | | | || ||| || | ||| || |||| ||| |
Sbjct 1336 CGGACTACAACACCG---GCGAC---CCGGGCGCCCACGCGCAGCGCGTGCAGCGGTCAG 1283
Query 144168 CCTTTCCGGATCGCTACGACAAACGTATGGCCGAGGC 144204
| ||||| || |||||| ||| |||| ||||||
Sbjct 1282 CATTTCCCGACCGCTACAACACGAAGATGGGCGAGGC 1246
Score = 89.7 bits (98), Expect = 5e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 77986 ATGTACGCCAACAATGCGGTGCCGGAGTCGCTGAACTTCCCGCACGACGCCATTGGCAGT 78045
|||||||||||| |||||||| ||||| |||||||||| ||||| || | ||| |
Sbjct 1511 ATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTCGGCGGC 1452
Query 78046 GACCATGACTCGGTCGGCCTGTTCCAGCAGCG 78077
||| |||||||||||||| |||||||||||
Sbjct 1451 GACGCGGACTCGGTCGGCCTTTTCCAGCAGCG 1420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500850387214800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |